Protein: | LIP1 |
Organism: | Saccharomyces cerevisiae |
Length: | 150 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LIP1.
Description | E-value | Query Range |
Subject Range |
|
237.0 | [0..16] | [149..7] |
|
162.0 | [0..17] | [150..7] |
|
117.0 | [0..31] | [150..17] |
Region A: Residues: [1-150] |
1 11 21 31 41 51 | | | | | | 1 MSQPTPIITT KSAAKPKPKI FNLFRVCFIS LLLIAAVEYF KYGTRINYEW FHCTPIKEPQ 60 61 SGSVIKLWAR GGPSCDKRGE YKTIVKRITR DYEPNDEHLS FCIIENDNVP PVHYPIHEDK 120 121 GEPGYVAYVG YDTDSELVQE LCADSTIYHM |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.598 | a.22.1 | Histone-fold |
View | Download | 0.509 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
View | Download | 0.500 | a.280.1 | Description not found. |
View | Download | 0.489 | a.22.1 | Histone-fold |
View | Download | 0.478 | d.67.1 | Threonyl-tRNA synthetase (ThrRS), second 'additional' domain |
View | Download | 0.456 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.416 | a.25.1 | Ferritin-like |
View | Download | 0.394 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
View | Download | 0.390 | d.89.1 | Origin of replication-binding domain, RBD-like |