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View Structure Prediction Details

Protein: IBI2
Organism: Saccharomyces cerevisiae
Length: 197 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IBI2.

Description E-value Query
Range
Subject
Range
gi|151946003 - gi|151946003|gb|EDN64235.1| conserved protein [Saccharomyces cerevisiae YJM789]
IBI2 - Protein of unknown function that associates with ribosomes; green fluorescent protein (GFP)-fusion p...
YM8V_YEAST - Uncharacterized protein YMR295C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR295C ...
2.0E-93 [1..197] [1..197]
SPBC19C7.04c - conserved fungal protein
YHY4_SCHPO - Uncharacterized protein C19C7.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC19C7...
1.0E-21 [49..138] [12..92]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHFRKKSSI SNTSDHDGAN RASDVKISED DKARLKMRTA SVADPILDAV QEAQPFEQAA  60
   61 DTFHDNMNRQ SYFSNEEGHV LCDVFGQPIT QADISNPTRA RDERPLDTIR SFEYAVSGDP 120
  121 VWAQQLETPT YGFRVRPDFP VFGAAVTYDA NGMPQQVGGA SSQMYGEQAV YQPQQHVQTE 180
  181 EKQKKKKKGL FGRMKKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle