| Protein: | FCP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 732 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FCP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..732] | [1..732] |
|
|
0.0 | [3..731] | [6..712] |
|
|
0.0 | [17..696] | [69..786] |
|
|
6.0E-83 | [49..415] | [6..382] |
|
|
1.0E-80 | [12..476] | [25..440] |
|
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7.0E-71 | [114..606] | [2..405] |
|
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6.0E-67 | [92..429] | [12..318] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MTTQIRSPQG LPYPIQIDKL IPSVGSYLHE GDRLLVYKFW YLVERASDTG DDDNEHDVSP 60
61 GGSAGSNGVS PPTKQLRESI EFFESPYEGD LISWNVDVGD EVATANQVIC EIKRPCNHDI 120
121 VYGGLCTQCG KEVSADAF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.420 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.403 | d.21.1 | Diaminopimelate epimerase-like |
|
Region A: Residues: [139-415] |
1 11 21 31 41 51
| | | | | |
1 DGVPLDVVGD VDLQISETEA IRTGKALKEH LRRDKKLILV VDLDQTIIHC GVDPTIAEWK 60
61 NDPNNPNFET LRDVKSFTLD EELVLPLMYM NDDGSMLRPP PVRKCWYYVK VRPGLKEFFA 120
121 KVAPLFEMHI YTMATRAYAL QIAKIVDPTG ELFGDRILSR DENGSLTTKS LAKLFPTDQS 180
181 MVVVIDDRGD VWNWCPNLIK VVPYNFFVGV GDINSNFLPK QSTGMLQLGR KTRQKSQESQ 240
241 ELLTDIMDNE KKLQEKIDKE VKRQEEKLNH QLATAEE
|
| Detection Method: | |
| Confidence: | 9.886057 |
| Match: | PF03031 |
| Description: | NLI interacting factor-like phosphatase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [416-489] |
1 11 21 31 41 51
| | | | | |
1 PPANESKEEL TKKLEYSASL EVQQQNRPLA KLQKHLHDQK LLVDDDDELY YLMGTLSNIH 60
61 KTYYDMLSQQ NEPE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.687 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.558 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.633 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.526 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.687 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.636 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.633 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.558 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.526 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.491 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.456 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.451 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.449 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.444 | a.64.1 | Saposin |
| View | Download | 0.429 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.420 | a.2.3 | Chaperone J-domain |
| View | Download | 0.418 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.372 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.371 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.354 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.353 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.351 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.351 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.328 | d.58.17 | Metal-binding domain |
| View | Download | 0.323 | b.34.9 | Tudor/PWWP/MBT |
| View | Download | 0.312 | a.3.1 | Cytochrome c |
| View | Download | 0.312 | a.64.1 | Saposin |
| View | Download | 0.311 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.293 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.291 | a.112.1 | Description not found. |
| View | Download | 0.290 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.285 | a.77.1 | DEATH domain |
| View | Download | 0.283 | d.48.1 | RecA protein, C-terminal domain |
| View | Download | 0.280 | d.201.1 | SRP19 |
| View | Download | 0.278 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.275 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.273 | a.39.1 | EF-hand |
| View | Download | 0.271 | a.17.1 | p8-MTCP1 |
| View | Download | 0.267 | a.38.1 | Helix-loop-helix DNA-binding domain |
| View | Download | 0.266 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.264 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.263 | a.3.1 | Cytochrome c |
| View | Download | 0.260 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.254 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.250 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.249 | a.74.1 | Cyclin-like |
| View | Download | 0.247 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.245 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.244 | a.7.7 | BAG domain |
| View | Download | 0.241 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.238 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.237 | b.36.1 | PDZ domain-like |
| View | Download | 0.234 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.230 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.229 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.229 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.227 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.224 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.224 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.216 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.214 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.211 | a.60.8 | HRDC-like |
| View | Download | 0.203 | a.3.1 | Cytochrome c |
|
Region A: Residues: [490-641] |
1 11 21 31 41 51
| | | | | |
1 PNLMEIIPSL KQKVFQNCYF VFSGLIPLGT DIQRSDIVIW TSTFGATSTP DIDYLTTHLI 60
61 TKNPSTYKAR LAKKFNPQIK IVHPDWIFEC LVNWKKVDEK PYTLIVDSPI SDEELQNFQT 120
121 QLQKRQEYLE ETQEQQHMLT SQENLNLFAA GT
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 1jnxX_ |
| Description: | Breast cancer associated protein, BRCA1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [642-732] |
1 11 21 31 41 51
| | | | | |
1 SWLNNDDDED IPDTASDDDE DDDHDDESDD ENNSEGIDRK RSIEDNHDDT SQKKTKAEPS 60
61 QDGPVQHKGE GDDNEDSDSQ LEEELMDMLD D
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.206 | 0.030 | nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.206 | N/A | N/A | a.74.1 | Cyclin-like |
