| Protein: | RCE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 315 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCE1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..315] | [1..315] |
|
|
1.0E-69 | [7..296] | [4..246] |
|
|
2.0E-66 | [11..257] | [43..270] |
|
|
9.0E-65 | [11..257] | [43..270] |
|
|
6.0E-61 | [11..257] | [35..254] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MLQFSTFLVL LYISISYVLP LYATSQPEGS KRDNPRTIKS RMQKLTIMLI SNLFLVPFLQ 60
61 SQLSSTTSHI SFKDAFLGLG IIPGYYAAL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [90-315] |
1 11 21 31 41 51
| | | | | |
1 PNPWQFSQFV KDLTKCVAML LTLYCGPVLD FVLYHLLNPK SSILEDFYHE FLNIWSFRNF 60
61 IFAPITEEIF YTSMLLTTYL NLIPHSQLSY QQLFWQPSLF FGLAHAHHAY EQLQEGSMTT 120
121 VSILLTTCFQ ILYTTLFGGL TKFVFVRTGG NLWCCIILHA LCNIMGFPGP SRLNLHFTVV 180
181 DKKAGRISKL VSIWNKCYFA LLVLGLISLK DTLQTLVGTP GYRITL
|
| Detection Method: | |
| Confidence: | 30.958607 |
| Match: | PF02517 |
| Description: | CAAX amino terminal protease family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| succinate dehydrogenase activity | 1.20204086283202 | bayes_pls_golite062009 |
| binding | 1.05108618626228 | bayes_pls_golite062009 |
| catalytic activity | 0.916346296983561 | bayes_pls_golite062009 |
