| Protein: | GAS3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 524 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAS3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..486] | [1..481] |
|
|
0.0 | [3..488] | [1..483] |
|
|
0.0 | [3..524] | [1..536] |
|
|
0.0 | [3..489] | [6..472] |
|
Region A: Residues: [1-291] |
1 11 21 31 41 51
| | | | | |
1 MQLSKSILLA ALAATPSLVN AMLPIHIKNY RFIKPSSATN SESDNEVFFV KGVDYQPGGS 60
61 SGYDADSDTD ILSDPEVCAR DAYAFQQLGV NTVRIYSLNP DLNHDKCMTI FNNAGIYAIL 120
121 DVNSGNYGES LNRADPSGTY DSLYLSRVFK FIDAFKNYPN VLGFFSGNEV INDQSDYAKI 180
181 DPPYIRAVQR DMKQYISKHA NRSIPVGYSA ADNTDLRLAT FKYLQCNSLD GNKVNDDLDI 240
241 SKSDFFGLNT YEWCSGTSSW ESSGYDKLNS TFEDAVIPLI FSEYGCNKNT P
|
| Detection Method: |  |
| Confidence: | 14.52 |
| Match: | 1g01A |
| Description: | Alkaline cellulase K catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, acting on glycosyl bonds | 2.54905777227767 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 2.53508565761702 | bayes_pls_golite062009 |
| hydrolase activity | 1.83134281287223 | bayes_pls_golite062009 |
| catalytic activity | 0.945396810092913 | bayes_pls_golite062009 |
| glucosidase activity | 0.730759777713712 | bayes_pls_golite062009 |
| beta-glucosidase activity | 0.465034466279462 | bayes_pls_golite062009 |
| chitinase activity | 0.2746484616376 | bayes_pls_golite062009 |
| glucan 1,3-beta-glucosidase activity | 0.148125357780819 | bayes_pls_golite062009 |
|
Region A: Residues: [292-368] |
1 11 21 31 41 51
| | | | | |
1 RTFDEVSEGL YGGLKNVFSG GLVYEYTEEA NNYGLVKLDD SGSLTYKDDF VNLESQLKNV 60
61 SLPTTKESEI SSDSIYK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.774 | d.93.1 | SH2 domain |
| View | Download | 0.550 | d.9.2 | Description not found. |
| View | Download | 0.533 | d.9.2 | Description not found. |
| View | Download | 0.510 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.421 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.376 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.372 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.372 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.371 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.366 | a.77.1 | DEATH domain |
| View | Download | 0.366 | b.5.1 | alpha-Amylase inhibitor tendamistat |
| View | Download | 0.335 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.330 | g.44.1 | RING/U-box |
| View | Download | 0.325 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.325 | d.10.1 | DNA-binding domain |
| View | Download | 0.312 | a.77.1 | DEATH domain |
| View | Download | 0.290 | b.1.18 | E set domains |
| View | Download | 0.278 | a.59.1 | PAH2 domain |
| View | Download | 0.275 | b.1.20 | Tp47 lipoprotein, middle and C-terminal domains |
| View | Download | 0.275 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.271 | b.1.2 | Fibronectin type III |
| View | Download | 0.271 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.268 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.256 | b.1.2 | Fibronectin type III |
| View | Download | 0.254 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.241 | b.1.2 | Fibronectin type III |
| View | Download | 0.237 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.229 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.225 | b.1.2 | Fibronectin type III |
| View | Download | 0.220 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.203 | a.35.1 | lambda repressor-like DNA-binding domains |
|
Region A: Residues: [369-524] |
1 11 21 31 41 51
| | | | | |
1 CDNSAITNIY SGFGTNNFTL PSQPAEIANM IEYGVNGTNT GKILTDYAVP TTFNYTIKNN 60
61 KDDTISATIS YDKANSLNEL DVTATTVAKS ASTSQSSSRS LTSSTSPSSS TGSSSSTGSS 120
121 SASSSSKSKG VGNIVNVSFS QSGYLALFAG LISALL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
