| Protein: | DML1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 475 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DML1.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [80..470] | [8..430] |
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0.0 | [80..470] | [8..430] |
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0.0 | [80..470] | [8..430] |
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0.0 | [80..473] | [8..433] |
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0.0 | [80..470] | [8..430] |
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0.0 | [80..473] | [8..433] |
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0.0 | [80..470] | [8..430] |
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0.0 | [80..470] | [8..430] |
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Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MHEVVTISVS QRANHLTTQF FNIQEGYLQL SKEQQVNDSK IFLNSVVDKV SKTISYAPRA 60
61 LLWDARTGNG SLGTYQYSE
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| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.555 | 0.247 | mitochondrial genome maintenance | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.562 | 0.103 | mitochondrial genome maintenance | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.633 | 0.061 | mitochondrial genome maintenance | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.590 | 0.011 | mitochondrial genome maintenance | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.593 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.553 | N/A | N/A | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.538 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.535 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.524 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.504 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.498 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.483 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.471 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.468 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.467 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.457 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.451 | N/A | N/A | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.440 | N/A | N/A | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.438 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.428 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.422 | N/A | N/A | b.36.1 | PDZ domain-like |
| View | Download | 0.418 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.417 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.412 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.410 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.409 | N/A | N/A | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.408 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.407 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.406 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.403 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.394 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.388 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.385 | N/A | N/A | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.384 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.380 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.379 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.376 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.375 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.370 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.369 | N/A | N/A | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.367 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.363 | N/A | N/A | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.362 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.360 | N/A | N/A | c.55.4 | Translational machinery components |
| View | Download | 0.359 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.349 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.348 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.346 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.345 | N/A | N/A | a.105.1 | FIS-like |
| View | Download | 0.345 | N/A | N/A | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.345 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.345 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.344 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.343 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.341 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.340 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.337 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.334 | N/A | N/A | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.332 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.331 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.330 | N/A | N/A | b.36.1 | PDZ domain-like |
| View | Download | 0.329 | N/A | N/A | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.328 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.327 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.325 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.324 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.324 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.322 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.322 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.319 | N/A | N/A | b.36.1 | PDZ domain-like |
| View | Download | 0.307 | N/A | N/A | b.36.1 | PDZ domain-like |
| View | Download | 0.303 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.301 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.299 | N/A | N/A | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.298 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.297 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.297 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.290 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.288 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.282 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.282 | N/A | N/A | d.58.49 | YajQ-like |
| View | Download | 0.281 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.275 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.267 | N/A | N/A | d.58.49 | YajQ-like |
| View | Download | 0.264 | N/A | N/A | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.256 | N/A | N/A | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.253 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.252 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.251 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.248 | N/A | N/A | d.13.1 | HIT-like |
| View | Download | 0.237 | N/A | N/A | d.10.1 | DNA-binding domain |
| View | Download | 0.237 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.237 | N/A | N/A | b.3.5 | B repeat unit of collagen binding surface protein (cna) |
| View | Download | 0.233 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.231 | N/A | N/A | c.55.4 | Translational machinery components |
| View | Download | 0.230 | N/A | N/A | d.88.1 | SRF-like |
| View | Download | 0.228 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.227 | N/A | N/A | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.227 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.226 | N/A | N/A | b.7.3 | PHL pollen allergen |
| View | Download | 0.225 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.224 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.218 | N/A | N/A | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.216 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.216 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.213 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.210 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.202 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.202 | N/A | N/A | b.1.1 | Immunoglobulin |
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Region A: Residues: [80-475] |
1 11 21 31 41 51
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1 SQDYHFGNED KFKEQTVIKT HPRIPKSEYQ SSLDAGAPLP CLNRENTMYW SDYSKLIYGP 60
61 SSFNILRNWY HDTENPNQPD FQNLGERKFD RYSIGYDEFT ENYLQEFFDG NLHRELEKCD 120
121 TLQGFNLVSD MESGWGGFSS ALLVELRNEL PKKAVFSWGH NEDDPFTDDF PMKRLSKKWL 180
181 PIISNKLRST INMMQESDLY FPLYAAPGLT NWETAGKSCR IFDSINATIS QSNLEQRKTM 240
241 DYLTTAITLG YSSRNMVTGM VIGDTDYSFC SRVLPFKNSH KPNSTHIFSK SFIDRGNQTH 300
301 KHHSEPDSRS KMIEMYTHRY FPSDTIPTEF SNDREFVLEL ESSEKNRDIF KHWNEFVVRY 360
361 FKNDSDREEL KNELSDYASA YESGWYEDED SGDDDM
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| Detection Method: | |
| Confidence: | 153.0 |
| Match: | 1ffxB_ |
| Description: | Tubulin:stathmin-like domain complex |
Matching Structure (courtesy of the PDB): |
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