| Protein: | HFA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 2123 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HFA1.
| Description | E-value | Query Range |
Subject Range |
|
|
2757.0 | [0..1] | [2123..53] |
|
|
2727.0 | [0..1] | [2123..134] |
|
|
2700.0 | [0..1] | [2123..320] |
|
Region A: Residues: [1-528] |
1 11 21 31 41 51
| | | | | |
1 MRSIRKWAYE TFNDEKIIQF VVMATPDDLH ANSEYIRMAD QYVQVPGGTN NNNYANIDLI 60
61 LDVAEQTDVD AVWAGWGHAS ENPCLPELLA SSQRKILFIG PPGRAMRSLG DKISSTIVAQ 120
121 SAKIPCIPWS GSHIDTIHID NKTNFVSVPD DVYVRGCCSS PEDALEKAKL IGFPVMIKAS 180
181 EGGGGKGIRR VDNEDDFIAL YRQAVNETPG SPMFVMKVVT DARHLEVQLL ADQYGTNITL 240
241 FGRDCSIQRR HQKIIEEAPV TITKPETFQR MERAAIRLGE LVGYVSAGTV EYLYSPKDDK 300
301 FYFLELNPRL QVEHPTTEMI SGVNLPATQL QIAMGIPMHM ISDIRKLYGL DPTGTSYIDF 360
361 KNLKRPSPKG HCISCRITSE DPNEGFKPST GKIHELNFRS SSNVWGYFSV GNNGAIHSFS 420
421 DSQFGHIFAV GNDRQDAKQN MVLALKDFSI RGEFKTPIEY LIELLETRDF ESNNISTGWL 480
481 DDLILKNLSS DSKLDPTLAI ICGAAMKAYV FTEKVRNKYL ELLRRGQV
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 2hjwA |
| Description: | No description for 2hjwA was found. |
|
Region A: Residues: [529-607] |
1 11 21 31 41 51
| | | | | |
1 PPKDFLKTKF PVDFIFDNNR YLFNVAQSSE EQFILSINKS QCEVNVQKLS SDCLLISVDG 60
61 KCHTVYWKDD IRGTRLSID
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.954 | b.3.1 | Starch-binding domain |
|
Region A: Residues: [608-687] |
1 11 21 31 41 51
| | | | | |
1 SNTIFLEAEL NPTQVISPTP GKLVKYLVRS GDHVFAGQQY AEIEIMKMQM PLVAKSDGVI 60
61 ELLRQPGSII EAGDVIAKLT
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 2dn8A |
| Description: | No description for 2dn8A was found. |
|
Region A: Residues: [688-928] |
1 11 21 31 41 51
| | | | | |
1 LDSPSKANES SLYRGELPVL GPPLIEGSRP NHKLRVLINR LENILNGYHE NSGIETTLKE 60
61 LIKILRDGRL PYSEWDSQIS TVRNRLPRQL NEGLGNLVKK SVSFPAKELH KLMKRYLEEN 120
121 TNDHVVYVAL QPLLKISERY SEGLANHECE IFLKLIKKYY AVEKIFENHD IHEERNLLNL 180
181 RRKDLTNLKK ILCISLSHAN VVAKNKLVTA ILHEYEPLCQ DSSKMSLKFR AVIHDLASLE 240
241 S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [929-1066] |
1 11 21 31 41 51
| | | | | |
1 KWAKEVAVKA RSVLLRGIFP PIKKRKEHIK TLLQLHIKDT GAENIHSRNI YSCMRDFGNL 60
61 IHSNLIQLQD LFFFFGHQDT ALSSIASEIY ARYAYGNYQL KSIKIHKGAP DLLMSWQFSS 120
121 LRNYLVNSDG ESDEFTKL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1067-1314] |
1 11 21 31 41 51
| | | | | |
1 SKPPSTSGKS SANSFGLLVN MRALESLEKT LDEVYEQIHI PEERLSSGEN SLIVNILSPI 60
61 RYRSENDLIK TLKIKLHENE RGLSKLKVNR ITFAFIAANA PAVKFYSFDG TTYDEISQIR 120
121 NMDPSYEAPL ELGKMSNYKI RSLPTYDSSI RIFEGISKFT PLDKRFFVRK IINSFMYNDQ 180
181 KTTEENLKAE INAQVVYMLE HLGAVDISNS DLNHIFLSFN TVLNIPVHRL EEIVSTILKT 240
241 HETRLFQE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1315-2123] |
1 11 21 31 41 51
| | | | | |
1 RITDVEICIS VECLETKKPA PLRLLISNKS GYVVKIETYY EKIGKNGNLI LEPCSEQSHY 60
61 SQKSLSLPYS VKDWLQPKRY KAQFMGTTYV YDFPGLFHQA AIQQWKRYFP KHKLNDSFFS 120
121 WVELIEQNGN LIKVNREPGL NNIGMVAFEI MVQTPEYPEG RNMIVISNDI TYNIGSFGPR 180
181 EDLFFDRVTN YARERGIPRI YLAANSGAKL GIAEELIPLF RVAWNDPSDP TKGFQYLYLA 240
241 PKDMQLLKDS GKGNSVVVEH KMVYGEERYI IKAIVGFEEG LGVECLQGSG LIAGATSKAY 300
301 RDIFTITAVT CRSVGIGSYL VRLGQRTIQV EDKPIILTGA SAINKVLGTD IYTSNLQIGG 360
361 TQIMYKNGIA HLTASNDMKA IEKIMTWLSY VPAKRDMSPP LLETMDRWDR DVDFKPAKQV 420
421 PYEARWLIEG KWDSNNNFQS GLFDKDSFFE TLSGWAKGVI VGRARLGGIP VGVIAVETKT 480
481 IEEIIPADPA NLDSSEFSVK EAGQVWYPNS AFKTAQTIND FNYGEQLPLI ILANWRGFSG 540
541 GQRDMYNEVL KYGSFIVDAL VDYKQPILIY IPPFGELRGG SWVVIDPTIN PEQMEMYADV 600
601 ESRGGVLEPD GVVSIKYRKE KMIETMIRLD STYGHLRRTL TEKKLSLEKQ NDLTKRLKIR 660
661 ERQLIPIYNQ ISIQFADLHD RSTRMLVKGV IRNELEWKKS RRFLYWRLRR RLNEGQVIKR 720
721 LQKKTCDNKT KMKYDDLLKI VQSWYNDLDV NDDRAVVEFI ERNSKKIDKN IEEFEISLLI 780
781 DELKKKFEDR RGNIVLEELT RLVDSKRKR
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1od2A |
| Description: | Acetyl-coenzyme A carboxylase |
Matching Structure (courtesy of the PDB): |
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