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View Structure Prediction Details

Protein: INP1
Organism: Saccharomyces cerevisiae
Length: 420 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INP1.

Description E-value Query
Range
Subject
Range
INP1_YEAST - Inheritance of peroxisomes protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=INP...
gi|190408430 - gi|190408430|gb|EDV11695.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207342176 - gi|207342176|gb|EDZ70022.1| YMR204Cp-like protein [Saccharomyces cerevisiae AWRI1631]
INP1 - Peripheral membrane protein of peroxisomes involved in peroxisomal inheritance; recruitment to perox...
0.0 [1..420] [1..420]

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Predicted Domain #1
Region A:
Residues: [1-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSRGETKK NSVRLTAKQE KKPQSTFQTL KQSLKLSNNK KLKQDSTQHS NDTNKSVKAK  60
   61 KNGTSSKKTG TQRKRISTQR FSLFTYGNVQ VMNSFVPIHN DIPNSSCIRR NSQVSANNVT 120
  121 ESSGVFFNDT QSQDSQNTIK LKPTSLMAKG PIEIYQICTG FDKLKENIAP FQKSSKASSH 180
  181 DGHVVNYLSI GRHGDIVHPV LPKLQITRLN GAGFKYFISF YNPERYWEIE FLPLISQSQS 240
  241 ELENSVKAFE NVISKICQFS HINEGATIGN NESLSDKFKL PPTSDIEPPN TEIINNDDDN 300
  301 DDDDDNYDDD DLNYLLDEEY EQGCTDNSFS VISNTCSNLN ASFLYPSDPT DAVSISINEA 360
  361 FKNAIRRTAP VLNIPIAAPS IHSKQQNKRY SSYPFIDSPP YLQDRHRRFQ RRSISGLGDL 420
  421 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle