YRC Public Data Repository - Protein Structure Prediction

Protein:	YMR181C
Organism:	Saccharomyces cerevisiae
Length:	154 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR181C.

Description	E-value	Query Range	Subject Range
YMR181C - Protein of unknown function; mRNA transcribed as part of a bicistronic transcript with a predicted t... YM46_YEAST - Uncharacterized protein YMR181C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR181C ... gi\|190408405 - gi\|190408405\|gb\|EDV11670.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi\|151945883 - gi\|151945883\|gb\|EDN64115.1\| conserved protein [Saccharomyces cerevisiae YJM789]	7.0E-60	[1..154]	[1..154]

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Predicted Domain #1

Region A:
Residues: [1-154]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLLQAEAK MNTSLYLTES IQQHEFNLTS PQSFYSSPSV PNSKNNSGIF SYNTANNSRV  60
   61 SSSDEFTTQQ DGMNTIMYKN NISKTFEDDI FYCPRSLLTP EEQVVYQEID KYYMEQALLT 120
  121 QLQISQTYSS TPKEEKIVKF NPYTSKSFSP ASSE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits