| Protein: | DNF3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1656 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNF3.
| Description | E-value | Query Range |
Subject Range |
|
|
1106.0 | [0..5] | [1634..5] |
|
|
1065.0 | [0..107] | [1620..38] |
|
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1054.0 | [0..91] | [1620..31] |
|
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1052.0 | [0..107] | [1619..34] |
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1049.0 | [0..107] | [1619..34] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MGIADGQRRR SSSLRTQMFN KHLYDKYRGR TDDEIELEDI NESKTFSGSD NNDKDDRDET 60
61 SGNYAAEEDY EMEEYGSPDV SYSIITKILD TILDRRRTFH SKDGRHIPII LDHNAIEYKQ 120
121 AATKRDGHLI DERFNKPYCD NRITSSRYTF YSFLPRQLYA QFSKLANTYF FIVAVLQMIP 180
181 GWSTT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [186-268] |
1 11 21 31 41 51
| | | | | |
1 GTYTTIIPLC VFMGISMTRE AWDDFRRHRL DKEENNKPVG VLVKDGNNDA QEVYTLPSSV 60
61 VSSTAYLTKS AAAENNPPLN DDR
|
| Detection Method: | |
| Confidence: | 1.32 |
| Match: | 2hc8A |
| Description: | No description for 2hc8A was found. |
|
Region A: Residues: [269-417] |
1 11 21 31 41 51
| | | | | |
1 NSSQGHFLDT HFNNFELLKN KYNVHIHQKK WEKLRVGDFV LLTQDDWVPA DLLLLTCDGE 60
61 NSECFVETMA LDGETNLKSK QPHPELNKLT KAASGLANIN AQVTVEDPNI DLYNFEGNLE 120
121 LKNHRNDTIM KYPLGPDNVI YRGSILRNT
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 2hc8A |
| Description: | No description for 2hc8A was found. |
|
Region A: Residues: [418-1516] |
1 11 21 31 41 51
| | | | | |
1 QNVVGMVIFS GEETKIRMNA LKNPRTKAPK LQRKINMIIV FMVFVVATIS LFSYLGHVLH 60
61 KKKYIDQNKA WYLFQADAGV APTIMSFIIM YNTVIPLSLY VTMEIIKVVQ SKMMEWDIDM 120
121 YHAETNTPCE SRTATILEEL GQVSYIFSDK TGTLTDNKMI FRKFSLCGSS WLHNVDLGNS 180
181 EDNFEDNRDN TNSLRLPPKA HNGSSIDVVS IGDQNVLDRL GFSDAPIEKG HRPSLDNFPK 240
241 SRNSIEYKGN SSAIYTGRPS MRSLFGKDNS HLSKQASVIS PSETFSENIK SSFDLIQFIQ 300
301 RYPTALFSQK AKFFFLSLAL CHSCLPKKTH NESIGEDSIE YQSSSPDELA LVTAARDLGY 360
361 IVLNRNAQIL TIKTFPDGFD GEAKLENYEI LNYIDFNSQR KRMSVLVRMP NQPNQVLLIC 420
421 KGADNVIMER LHDRELAAKK MADICTSTKE RKDAEAELVL QQRKSLERMV DEEAMARTSL 480
481 RNSLSSVPRA SLSLQAVRKS LSMKNSRTRD PEKQIDSIDQ FLETVKKSDQ EIGSVVNKSR 540
541 KSLHKQQIEK YGPRISIDGT HFPNNNVPID TRKEGLQHDY DTEILEHIGS DELILNEEYV 600
601 IERTLQAIDE FSTEGLRTLV YAYKWIDIGQ YENWNKRYHQ AKTSLTDRKI KVDEAGAEIE 660
661 DGLNLLGVTA IEDKLQDGVS EAIEKIRRAG IKMWMLTGDK RETAINIGYS CMLIKDYSTV 720
721 VILTTTDENI ISKMNAVSQE VDSGNIAHCV VVIDGATMAM FEGNPTYMSV FVELCTKTDS 780
781 VICCRASPSQ KALMVSNIRN TDPNLVTLAI GDGANDIAMI QSADIGVGIA GKEGLQASRV 840
841 SDYSIGQFRF LLKLLFVHGR YNYIRTSKFM LCTFYKEITF YFTQLIYQRY TMFSGSSLYE 900
901 PWSLSMFNTL FTSLPVLCIG MFEKDLKPMT LLTVPELYSY GRLSQGFNWL IFMEWVILAT 960
961 TNSLIITFLN VVMWGMSSLS DNTMYPLGLI NFTAIVALIN VKSQFVEMHN RNWLAFTSVV1020
1021 LSCGGWLVWC CALPILNNTD QIYDVAYGFY NHFGKDITFW CTSLVLALLP ITLDIVYKTF1080
1081 KVMIWPSDSD IFAELEQKS
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1iwoA |
| Description: | Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1517-1656] |
1 11 21 31 41 51
| | | | | |
1 DIRKKLELGA YSEMRQGWTW DKDPSTFTRY TDKVLSRPRT NSRASAKTHN SSIYSMSNGN 60
61 VDHSSKKNFF GNSSKKSSER YEVLPSGKLI KRPSLKTQSS KDSIGGNITT KLTKKLKLPS 120
121 RNVEDEDVNQ IIQARLKDLE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
