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View Structure Prediction Details

Protein: YMR158W-B
Organism: Saccharomyces cerevisiae
Length: 106 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR158W-B.

Description E-value Query
Range
Subject
Range
gi|51014067 - gi|51014067|gb|AAT93327.1| YMR158W-A [Saccharomyces cerevisiae]
130.0 [0..1] [106..1]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHFVPSISL FMASVSFSVF FSHLATSWEC SFFRSESFCC KTLFSMVPLI NSSFNLSVFL  60
   61 FFNAITSFNL RISCSLLFSS FCRIASVFNK ASSWLTMLPP MAPLLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.727 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.724 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.724 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.697 a.118.11 Cytochrome c oxidase subunit E
View Download 0.681 a.40.1 Calponin-homology domain, CH-domain
View Download 0.656 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.647 d.54.1 Enolase N-terminal domain-like
View Download 0.578 a.118.8 TPR-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle