| Protein: | GAT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 560 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAT2.
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..4] | [524..166] |
|
|
265.0 | [0..2] | [524..180] |
|
|
259.0 | [0..3] | [527..167] |
|
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258.0 | [0..3] | [524..184] |
|
|
255.0 | [0..4] | [524..178] |
|
|
255.0 | [0..4] | [527..160] |
|
|
249.0 | [0..4] | [527..164] |
|
|
247.0 | [0..3] | [558..169] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MQAPNIYPFS QTQPQALPGF TYGPPQLVFD HSAPRVDPLH STVTINSPLP LQHYNGPNAH 60
61 INSANNNYAY YYHHPNNNDN NNHSNN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.366 | d.95.1 | Glucose permease domain IIB |
| View | Download | 0.350 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.337 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.303 | b.1.1 | Immunoglobulin |
| View | Download | 0.303 | b.1.1 | Immunoglobulin |
| View | Download | 0.279 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.267 | d.17.5 | Uracil-DNA glycosylase inhibitor protein |
| View | Download | 0.243 | b.1.1 | Immunoglobulin |
|
Region A: Residues: [87-446] |
1 11 21 31 41 51
| | | | | |
1 TIKNNNINSV LPAVNIQISN NSHYRNTHQI PSAPQRLVSI IPDPHMPPNI SHFQLNNIHP 60
61 QMHAPVATDI HFQQVPVYNK TNNGIGTDNI NNDKPVNSNQ NEVLDNIDER SCHEINRVVS 120
121 FSKHFENNEL TTTANDLNIQ STMDELAKLK SLSNSTHFRQ SIATQNFHSL QNHITTIENR 180
181 LASLLTDRQQ EQQQLKQQES EKESSSPFSN KIKLPSLQEL TDSISTQHLP TFYDNKRHAS 240
241 DTDLKSSTLH GPLYHRHAFL STSSSSPSPT AGSAPLQKLQ VPRQDDPNDK KMNISSSPFN 300
301 SITYIPNTTL SPMVQTQLKN LTTSNLNTKK KNNRGRPRAI QRQPTLTTSS HFINNSNPGA 360
361
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [447-560] |
1 11 21 31 41 51
| | | | | |
1 AAVSTTTPAA NSDEKNPNAK KIIEFCFHCG ETETPEWRKG PYGTRTLCNA CGLFYRKVTK 60
61 KFGSKSSNLL LRYRRSIDLA NDRRIPDFIT IPNRFIHDMD NDQTLDSEYN TILQ
|
| Detection Method: | |
| Confidence: | 43.39794 |
| Match: | 1gnfA |
| Description: | SOLUTION STRUCTURE OF THE N-TERMINAL ZINC FINGER OF MURINE GATA-1, NMR, 25 STRUCTURES |
Matching Structure (courtesy of the PDB): |
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