| Protein: | MED11 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 131 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED11.
| Description | E-value | Query Range |
Subject Range |
|
|
132.0 | [0..18] | [125..8] |
|
|
114.0 | [0..12] | [125..76] |
|
|
107.0 | [0..18] | [118..3] |
|
|
48.0 | [0..21] | [125..11] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MQVLNTKSET KQENETMQPP YIQERLKSLN DIETQLCSML QEASQVTFIF GELKRGNESV 60
61 KPQFENHVKQ FYERLDKSTT QLRKEIQLLD ENVGTRLLPI NVNKKALGQD TEKMEEQLDL 120
121 LSAILDPSKS K
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.661 | a.7.8 | GAT domain |
| View | Download | 0.661 | a.7.8 | GAT domain |
| View | Download | 0.597 | a.47.2 | t-snare proteins |
| View | Download | 0.597 | a.47.2 | t-snare proteins |
| View | Download | 0.589 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.589 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.576 | a.215.1 | Description not found. |
| View | Download | 0.526 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.470 | a.47.2 | t-snare proteins |
