| Protein: | MYO5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1219 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYO5.
| Description | E-value | Query Range |
Subject Range |
|
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1319.0 | [0..23] | [1145..4] |
|
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1319.0 | [0..23] | [1145..4] |
|
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1313.0 | [0..23] | [1145..4] |
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1311.0 | [0..23] | [1145..4] |
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1306.0 | [0..23] | [1145..4] |
|
Region A: Residues: [1-642] |
1 11 21 31 41 51
| | | | | |
1 MAILKRGARK KVHQEPAKRS ANIKKATFDS SKKKEVGVSD LTLLSKISDE AINENLKKRF 60
61 LNATIYTYIG HVLISVNPFR DLGIYTDAVM NEYKGKNRLE VPPHVFAIAE SMYYNMKSYN 120
121 ENQCVIISGE SGAGKTEAAK RIMQYIAAAS STHTESIGKI KDMVLATNPL LESFGCAKTL 180
181 RNNNSSRHGK YLEIKFNNQF EPCAGNITNY LLEKQRVVSQ IKNERNFHIF YQFTKGASDA 240
241 YRQTFGVQKP EQYVYTAAAG CISAETIDDL QDYQETLKAM RVIGLGQEEQ DQIFRMLAAI 300
301 LWIGNVSFIE NEEGNAQVRD TSVTDFVAYL LQIDSQLLIK SLVERIMETN HGMKRGSVYH 360
361 VPLNIVQADA VRDALAKAIY NNLFDWIVSR VNKSLQAFPG AEKSIGILDI YGFEIFEHNS 420
421 FEQICINYVN EKLQQIFIQL TLKSEQETYE REKIQWTPIK YFDNKVVCDL IEARRPPGIF 480
481 AAMNDSVATA HADSNAADQA FAQRLNLFTT NPHFDLRSNK FVIKHYAGDV TYDIDGITDK 540
541 NKDQLQKDLV ELIGTTTNTF LATIFPDTVD RESKRRPPTA GDKIIKSAND LVETLSKAQP 600
601 SYIRTIKPNE TKSPNDYDDR QVLHQIKYLG LQENVRIRRA GF
|
| Detection Method: |  |
| Confidence: | 2660.0 |
| Match: | 1lkxA |
| Description: | Myosin S1, motor domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [643-714] |
1 11 21 31 41 51
| | | | | |
1 AYRQVFEKFV ERFYLLSPHC SYAGDYTWQG DTLDAVKYIL QDSSIPQQEY QLGVTSVFIK 60
61 TPETLFALEH MR
|
| Detection Method: | |
| Confidence: | 2660.0 |
| Match: | 1lkxA |
| Description: | Myosin S1, motor domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [715-768] |
1 11 21 31 41 51
| | | | | |
1 DRYWHNMAAR IQRAWRRFLQ RRIDAATKIQ RTIRERKEGN KYEKLRDYGT KVLG
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 1wdcA |
| Description: | SCALLOP MYOSIN REGULATORY DOMAIN |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [769-842] |
1 11 21 31 41 51
| | | | | |
1 GRKERRSMSL LGYRAFMGDY LSCNESKSKG AYIKRQVSIK EKVIFSIHGE ALHTKFGRSA 60
61 QRLKKTFLLT PTTL
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [843-905] |
1 11 21 31 41 51
| | | | | |
1 YIVGQTLVQN AMTYTQDYKI DVRNIQAVSL TNLQDDWVAI KLASSGQPDP LINTYFKTEL 60
61 ITH
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [906-957] |
1 11 21 31 41 51
| | | | | |
1 LKRLNDKIQI KIGSAIEYQK KPGKLHSVKC QINESAPKYG DIYKSSTISV RR
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [958-1070] |
1 11 21 31 41 51
| | | | | |
1 GNPPNSQVHK KPRKKSSISS GYHASSSQAT RRPVSIAAAQ HVPTAPASRH SKKPAPPPPG 60
61 MQNKAATRRS VPNPASTLTA SQSNARPSPP TAATRATPAA TPAAAAMGSG RQA
|
| Detection Method: | |
| Confidence: | 8.21 |
| Match: | |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [1071-1167] |
1 11 21 31 41 51
| | | | | |
1 NIPPPPPPPP PSSKPKEPMF EAAYDFPGSG SPSELPLKKG DVIYITREEP SGWSLGKLLD 60
61 GSKEGWVPTA YMKPHSGNNN IPTPPQNRDV PKPVLNS
|
| Detection Method: | |
| Confidence: | 2.30103 |
| Match: | 1awjA |
| Description: | INTRAMOLECULAR ITK-PROLINE COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1168-1219] |
1 11 21 31 41 51
| | | | | |
1 VQHDNTSANV IPAAAQASLG DGLANALAAR ANKMRLESDD EEANEDEEED DW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.381 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.367 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.361 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.353 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.353 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.353 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.353 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.281 | a.16.1 | S15/NS1 RNA-binding domain |
