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View Structure Prediction Details

Protein: PGM2
Organism: Saccharomyces cerevisiae
Length: 569 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGM2.

Description E-value Query
Range		 Subject
Range
gi|190408333 - gi|190408333|gb|EDV11598.1| phosphoglucomutase [Saccharomyces cerevisiae RM11-1a]
gi|207342323 - gi|207342323|gb|EDZ70115.1| YMR105Cp-like protein [Saccharomyces cerevisiae AWRI1631]
PGM2_YEAST - Phosphoglucomutase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PGM2 PE=1 SV=1
PGM2 - Phosphoglucomutase, catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which ...
 0.0 [1..569] [1..569]
PGMC_MESCR - Phosphoglucomutase, cytoplasmic OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1
 0.0 [2..569] [3..583]
PGMC2_ARATH - Probable phosphoglucomutase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At1g70730 PE=2 SV=1
 0.0 [1..569] [2..585]
PGMC2_MAIZE - Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2
 0.0 [3..569] [4..583]
PGMC_SOLTU - Phosphoglucomutase, cytoplasmic OS=Solanum tuberosum GN=PGM1 PE=2 SV=1
 0.0 [2..569] [3..583]
PGM1_RABIT - Phosphoglucomutase-1 OS=Oryctolagus cuniculus GN=PGM1 PE=1 SV=2
 0.0 [4..569] [3..562]
gi|18076790 - gi|18076790|emb|CAC85913.1| phosphoglucomutase [Triticum aestivum]
 0.0 [1..569] [1..581]
PGMC_PEA - Phosphoglucomutase, cytoplasmic OS=Pisum sativum GN=PGM1 PE=2 SV=1
 0.0 [3..569] [4..582]
PGM1_MOUSE - Phosphoglucomutase-1 OS=Mus musculus GN=Pgm1 PE=1 SV=4
 0.0 [4..569] [3..562]

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Predicted Domain #1
Region A:
Residues: [1-191] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFQIETVPT KPYEDQKPGT SGLRKKTKVF KDEPNYTENF IQSIMEAIPE GSKGATLVVG  60
   61 GDGRYYNDVI LHKIAAIGAA NGIKKLVIGQ HGLLSTPAAS HIMRTYEEKC TGGIILTASH 120
  121 NPGGPENDMG IKYNLSNGGP APESVTNAIW EISKKLTSYK IIKDFPELDL GTIGKNKKYG 180
  181 PLLVDIIDIT K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1736.0
Match: 1c47A_
Description: Phosphoglucomutase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoglucomutase activity 3.58264389178108 bayes_pls_golite062009
binding 1.81828980398861 bayes_pls_golite062009
structural molecule activity 1.71130645303643 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 0.9938893438261 bayes_pls_golite062009
phosphomannomutase activity 0.96914970670646 bayes_pls_golite062009
catalytic activity 0.792640318995558 bayes_pls_golite062009
protein binding 0.359358565373414 bayes_pls_golite062009
isomerase activity 0.340395019264179 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [192-305] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYVNFLKEIF DFDLIKKFID NQRSTKNWKL LFDSMNGVTG PYGKAIFVDE FGLPADEVLQ  60
   61 NWHPSPDFGG MHPDPNLTYA SSLVKRVDRE KIEFGAASDG DGDRNMIYGY GPSF

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [386-420] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHVREKDGVW AIMAWLNILA IYNKHHPENE ASIKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1736.0
Match: 1c47A_
Description: Phosphoglucomutase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [306-385] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSPGDSVAII AEYAAEIPYF AKQGIYGLAR SFPTSGAIDR VAKAHGLNCY EVPTGWKFFC  60
   61 ALFDAKKLSI CGEESFGTGS

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [421-431] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQNEFWAKYG R

[Run NCBI BLAST on this sequence.]

Region C:
Residues: [483-493] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYTDLDGSVS D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1736.0
Match: 1c47A_
Description: Phosphoglucomutase
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [432-482] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFFTRYDFEK VETEKANKIV DQLRAYVTKS GVVNSAFPAD ESLKVTDCGD F

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [494-569] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQGLYVKLSN GARFVLRLSG TGSSGATIRL YIEKYCDDKS QYQKTAEEYL KPIINSVIKF  60
   61 LNFKQVLGTE EPTVRT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1736.0
Match: 1c47A_
Description: Phosphoglucomutase
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle