| Protein: | ATP25 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 612 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP25.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..612] | [1..612] |
|
Region A: Residues: [1-612] |
1 11 21 31 41 51
| | | | | |
1 MNKFCLLPFH GKRIGVANIP FTILFKKGPY FLHSHITAVY YSTKGKNDSH EQSRVSKKST 60
61 FTPLETPWYL RIVDNEKELM EGKKNNHHTM NKELEIPKTS PNSLRKIADL LTGKLGLDDF 120
121 LVFDLRKKSP NSVSAVNKLG DFMVICTARS TKHCHKSFLE LNKFLKHEFC SSAYVEGNFN 180
181 ERQESRRKRR LARKSNLSKL LGRSSECSAK DLNSEAWYMI DCRVDGIFVN ILTQRRRNEL 240
241 NLEELYAPEN EKSKFQNIDS GNVPTISGVN EISSNNNILL GLRRLAQQRR RYSTINPNGL 300
301 SNLRYFLQKE DFKGANKIIQ SSSGTETHNI RTLEHVKNTL KDLVGQERKV DVVQWKSLFD 360
361 EHSTFLTINQ SAAYWPLRLE YAILLNKADP QFYSDRVFLK DYLLLKKSLG QELIREDLIA 420
421 LLEMVLKTQH SSHSYFNLVK QNRVIIRALN LFKGLQTEDD GSVVYDEVVI SLLLNSMVAD 480
481 ERVKLRSLYE TIDHIFQTFG DKLTSGMIVS ILQNLAKIKD WNKLLQVWEA ITPTEGEGQD 540
541 KRPWNEFINV INQSGDSHVI SKIVNNGHLL WIRRLNVNVT PELCNSIKAL LKTAGMENST 600
601 LEEFLVRGTN NQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.565 | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.511 | d.58.12 | eEF-1beta-like |
| View | Download | 0.508 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.493 | d.58.5 | GlnB-like |
| View | Download | 0.423 | d.52.1 | Alpha-lytic protease prodomain |
|
Region A: Residues: [74-298] |
1 11 21 31 41 51
| | | | | |
1 DNEKELMEGK KNNHHTMNKE LEIPKTSPNS LRKIADLLTG KLGLDDFLVF DLRKKSPNSV 60
61 SAVNKLGDFM VICTARSTKH CHKSFLELNK FLKHEFCSSA YVEGNFNERQ ESRRKRRLAR 120
121 KSNLSKLLGR SSECSAKDLN SEAWYMIDCR VDGIFVNILT QRRRNELNLE ELYAPENEKS 180
181 KFQNIDSGNV PTISGVNEIS SNNNILLGLR RLAQQRRRYS TINPN
|
| Detection Method: | |
| Confidence: | 4.86 |
| Match: | 2id1A |
| Description: | No description for 2id1A was found. |
| Term | Confidence | Notes |
| nucleic acid binding | 1.9222021855587 | bayes_pls_golite062009 |
| RNA binding | 1.81422668974359 | bayes_pls_golite062009 |
| DNA binding | 1.16472134952015 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.16464844129763 | bayes_pls_golite062009 |
| binding | 1.10423270106549 | bayes_pls_golite062009 |
| catalytic activity | 0.718799603354138 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.650195135825587 | bayes_pls_golite062009 |
| transferase activity | 0.245732860673913 | bayes_pls_golite062009 |
| protein binding | 0.154267444140651 | bayes_pls_golite062009 |
|
Region A: Residues: [299-612] |
1 11 21 31 41 51
| | | | | |
1 GLSNLRYFLQ KEDFKGANKI IQSSSGTETH NIRTLEHVKN TLKDLVGQER KVDVVQWKSL 60
61 FDEHSTFLTI NQSAAYWPLR LEYAILLNKA DPQFYSDRVF LKDYLLLKKS LGQELIREDL 120
121 IALLEMVLKT QHSSHSYFNL VKQNRVIIRA LNLFKGLQTE DDGSVVYDEV VISLLLNSMV 180
181 ADERVKLRSL YETIDHIFQT FGDKLTSGMI VSILQNLAKI KDWNKLLQVW EAITPTEGEG 240
241 QDKRPWNEFI NVINQSGDSH VISKIVNNGH LLWIRRLNVN VTPELCNSIK ALLKTAGMEN 300
301 STLEEFLVRG TNNQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
