YRC Public Data Repository - Protein Structure Prediction

Protein:	MTG1
Organism:	Saccharomyces cerevisiae
Length:	367 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTG1.

Description	E-value	Query Range	Subject Range
MTG1 - Putative GTPase peripheral to the mitochondrial inner membrane, essential for respiratory competence... MTG1_YEAST - Mitochondrial GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MTG1 PE=1 SV=1	9.0E-64	[1..367]	[1..367]
ENGA_MYCPN - GTP-binding protein engA OS=Mycoplasma pneumoniae GN=engA PE=3 SV=2 DER_MYCPN - GTPase Der OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=der PE=3 SV=2	6.0E-57	[7..359]	[35..362]
DER_CLOPE, ENGA_... - GTP-binding protein engA OS=Clostridium perfringens GN=engA PE=3 SV=1, GTPase Der OS=Clostridium per... DER_CLOP1 - GTPase Der OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 82... DER_CLOPS - GTPase Der OS=Clostridium perfringens (strain SM101 / Type A) GN=der PE=3 SV=1 gi\|168217042, gi... - gi\|182380862\|gb\|EDT78341.1\| putative GTP-binding protein Era [Clostridium perfringens NCTC 8239], gi... DER_CLOPE - GTPase Der OS=Clostridium perfringens (strain 13 / Type A) GN=der PE=3 SV=1 gi\|169299237, gi... - gi\|169342731\|ref\|ZP_02863772.1\| putative GTP-binding protein Era [Clostridium perfringens C str. JGS... gi\|177908885, gi... - gi\|182625851\|ref\|ZP_02953617.1\| putative GTP-binding protein Era [Clostridium perfringens D str. JGS... gi\|170661368, gi... - gi\|170661368\|gb\|EDT14051.1\| putative GTP-binding protein Era [Clostridium perfringens E str. JGS1987... gi\|170711316, gi... - gi\|170711316\|gb\|EDT23498.1\| putative GTP-binding protein Era [Clostridium perfringens B str. ATCC 36... gi\|170714259, gi... - gi\|170714259\|gb\|EDT26441.1\| putative GTP-binding protein Era [Clostridium perfringens CPE str. F4969...	2.0E-56	[8..359]	[38..359]
DER_LISMC - GTPase Der OS=Listeria monocytogenes serotype 4b (strain CLIP80459) GN=der PE=3 SV=1 gi\|254825568 - gi\|254825568\|ref\|ZP_05230569.1\| GTP-binding protein EngA [Listeria monocytogenes FSL J1-194] ENGA_LISMC - GTP-binding protein engA OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=engA PE=3 SV=1 gi\|254993214 - gi\|254993214\|ref\|ZP_05275404.1\| GTP-binding protein EngA [Listeria monocytogenes FSL J2-064] gi\|254877945 - gi\|254877945\|ref\|ZP_05250655.1\| GTP-binding protein EngA [Listeria monocytogenes FSL J2-071] gi\|255028956 - gi\|255028956\|ref\|ZP_05300907.1\| GTP-binding protein EngA [Listeria monocytogenes LO28] gi\|153196444, gi... - gi\|254831462\|ref\|ZP_05236117.1\| GTP-binding protein EngA [Listeria monocytogenes 10403S], gi\|1531964... gi\|254899366, gi... - gi\|254899366\|ref\|ZP_05259290.1\| GTP-binding protein EngA [Listeria monocytogenes J0161], gi\|15318342... gi\|133726665, gi... - gi\|254871620\|ref\|ZP_05244330.1\| GTP-binding protein EngA [Listeria monocytogenes FSL N1-017], gi\|153... gi\|153191436, gi... - gi\|254912495\|ref\|ZP_05262507.1\| GTP-binding protein EngA [Listeria monocytogenes J2818], gi\|15319143... gi\|133732163, gi... - gi\|254936822\|ref\|ZP_05268519.1\| GTP-binding protein EngA [Listeria monocytogenes F6900], gi\|15317998... gi\|133729617, gi... - gi\|254827178\|ref\|ZP_05231865.1\| GTP-binding protein EngA [Listeria monocytogenes FSL N3-165], gi\|153... DER_LISMO, ENGA_... - GTP-binding protein engA OS=Listeria monocytogenes GN=engA PE=3 SV=1, GTPase Der OS=Listeria monocyt... gi\|133735000, gi... - gi\|254931892\|ref\|ZP_05265251.1\| GTP-binding protein EngA [Listeria monocytogenes HPB2262], gi\|153202... gi\|224501264 - gi\|224501264\|ref\|ZP_03669571.1\| GTP-binding protein EngA [Listeria monocytogenes FSL R2-561] gi\|224498613 - gi\|224498613\|ref\|ZP_03666962.1\| GTP-binding protein EngA [Listeria monocytogenes Finland 1988] DER_LISMF - GTPase Der OS=Listeria monocytogenes serotype 4b (strain F2365) GN=der PE=3 SV=1 DER_LISMH - GTPase Der OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=der PE=3 SV=1 DER_LISMO - GTPase Der OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=der PE=3 SV=1	2.0E-56	[8..359]	[38..358]
ENGA_LISIN, DER_... - GTP-binding protein engA OS=Listeria innocua GN=engA PE=3 SV=1, GTPase Der OS=Listeria innocua GN=de... DER_LISIN - GTPase Der OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=der PE=3 SV=1	7.0E-56	[8..359]	[38..358]
DER_STRR6 - GTPase Der OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=der PE=3 SV=1 DER_STRPN - GTPase Der OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=der PE=3 SV=1 DER_STRP2 - GTPase Der OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=der PE=3 SV=1 gi\|149011426, gi... - gi\|149011426\|ref\|ZP_01832673.1\| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumo... DER_STRPI - GTPase Der OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=der PE=3 SV=1 gi\|148997762, gi... - gi\|148997762\|ref\|ZP_01825326.1\| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumo... DER_STRPS - GTPase Der OS=Streptococcus pneumoniae (strain CGSP14) GN=der PE=3 SV=1 gi\|148989364, gi... - gi\|148989364\|ref\|ZP_01820732.1\| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumo... DER_STRP4 - GTPase Der OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=der PE=3 SV=1 DER_STRPJ - GTPase Der OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=der PE=3 SV=1 ENGA_STRPN, DER_... - GTP-binding protein engA OS=Streptococcus pneumoniae GN=engA PE=3 SV=1, GTPase Der OS=Streptococcus ... gi\|168487543, gi... - gi\|183569654\|gb\|EDT90182.1\| GTP-binding protein EngA [Streptococcus pneumoniae CDC1087-00], gi\|16848... gi\|183574158, gi... - gi\|183574158\|gb\|EDT94686.1\| GTP-binding protein EngA [Streptococcus pneumoniae CDC0288-04], gi\|16849... gi\|168493616, gi... - gi\|183576280\|gb\|EDT96808.1\| GTP-binding protein EngA [Streptococcus pneumoniae CDC3059-06], gi\|16849... gi\|183578800, gi... - gi\|183578800\|gb\|EDT99328.1\| GTP-binding protein EngA [Streptococcus pneumoniae MLV-016], gi\|16857510... DER_STRZJ - GTPase Der OS=Streptococcus pneumoniae (strain JJA) GN=der PE=3 SV=1 gi\|149020788, gi... - gi\|149020788\|ref\|ZP_01835317.1\| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumo... DER_STRZT - GTPase Der OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=der PE=3 SV=1 gi\|237649250 - gi\|237649250\|ref\|ZP_04523502.1\| GTP-binding protein EngA [Streptococcus pneumoniae CCRI 1974] DER_STRZP - GTPase Der OS=Streptococcus pneumoniae (strain P1031) GN=der PE=3 SV=1 DER_STRP7 - GTPase Der OS=Streptococcus pneumoniae (strain 70585) GN=der PE=3 SV=1 gi\|237822010 - gi\|237822010\|ref\|ZP_04597855.1\| GTP-binding protein EngA [Streptococcus pneumoniae CCRI 1974M2] gi\|242244928, gi... - gi\|242244928\|ref\|ZP_04799365.1\| GTP-binding protein EngA [Streptococcus pneumoniae TCH8431/19A], gi\|...	3.0E-55	[4..359]	[33..358]
DER_STRPC - GTPase Der OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=der PE=3 SV=1 gi\|13621599, gi\|... - gi\|15674498\|ref\|NP_268672.1\| GTP-binding protein EngA [Streptococcus pyogenes M1 GAS], gi\|13621599\|g... ENGA_STRPY - (P64064) GTP-binding protein engA DER_STRPB - GTPase Der OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=der PE=3 SV=1 DER_STRP8, ENGA_... - GTP-binding protein engA OS=Streptococcus pyogenes serotype M18 GN=engA PE=3 SV=1, GTPase Der OS=Str... DER_STRPZ - GTPase Der OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=der PE=3 SV=1 DER_STRP8 - GTPase Der OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=der PE=3 SV=1 DER_STRP6 - GTPase Der OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=der PE=3 SV=1 DER_STRP1 - GTPase Der OS=Streptococcus pyogenes serotype M1 GN=der PE=3 SV=1 gi\|56808746 - gi\|56808746\|ref\|ZP_00366464.1\| COG1160: Predicted GTPases [Streptococcus pyogenes M49 591] gi\|71910101, gi\|... - gi\|71910101\|ref\|YP_281651.1\| GTP-binding protein EngA [Streptococcus pyogenes MGAS5005], gi\|71852883... ENGA_STRP6, DER_... - GTP-binding protein engA OS=Streptococcus pyogenes serotype M6 GN=engA PE=3 SV=1, GTPase Der OS=Stre...	4.0E-55	[4..359]	[33..358]
DER_BACSU - GTPase Der OS=Bacillus subtilis (strain 168) GN=der PE=1 SV=1 ENGA_BACSU, DER_... - GTP-binding protein engA OS=Bacillus subtilis GN=engA PE=1 SV=1, GTPase Der OS=Bacillus subtilis GN=... gi\|221319445 - gi\|221319445\|ref\|ZP_03600739.1\| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. JH6... gi\|221323721 - gi\|221323721\|ref\|ZP_03605015.1\| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. SMY... gi\|221314523 - gi\|221314523\|ref\|ZP_03596328.1\| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. NCI...	6.0E-55	[8..357]	[38..356]
gi\|6681650 - gi\|6681650\|dbj\|BAA88823.1\| phosphoglycerate dehydrogenase [Streptococcus mutans]	3.0E-54	[4..355]	[33..354]
DER_BACHD, ENGA_... - GTP-binding protein engA OS=Bacillus halodurans GN=engA PE=3 SV=1, GTPase Der OS=Bacillus halodurans... DER_BACHD - GTPase Der OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) G...	1.0E-53	[8..357]	[38..356]

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Predicted Domain #1

Region A:
Residues: [1-137]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHINVRGTRK IISNVSSFTP RYEFPKYSMP LTDFKGHQVK ALKTFEKLLP QMNMIIELRD  60
   61 IRAPLSTRNV VFDRIARKEH DVMKLVVYTR KDLMPGNKPY IGKLKNWHEE LGEKFILLDC 120
  121 RNKTDVRNLL KILEWQN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	18.0
Match:	1egaA_
Description:	GTPase Era, N-terminal domain; GTPase Era C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [138-367]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YELETNGGYL PMGYRALITG MPNVGKSTLI NSLRTIFHNQ VNMGRKFKKV AKTGAEAGVT  60
   61 RATSEVIRVT SRNTESRNEI YLIDTPGIGV PGRVSDHNRM LGLALCGSVK NNLVDPIFQA 120
  121 DYLLYLMNLQ NLNDGRTELY PGSTNSPTND IYDVLRRLQV NKSQNEKSTA IEWTNKWRLH 180
  181 GKGIIFDPEV LLNNDEFSYK NYVNDQLEKL GDLSYEGLSN KLKGNPNQVF

[Run NCBI BLAST on this sequence.]

Detection Method:	ORFEUS
Confidence:	14.91
Match:	1dg3A
Description:	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits