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View Structure Prediction Details

Protein: YMR082C
Organism: Saccharomyces cerevisiae
Length: 118 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YMR082C.

Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIAEITIRQ KFSYPFLFGN VLGHPWPRNV PRKEIKMLLF RTANNSFPGF LLIFTRKRRN  60
   61 LPKQRDNEIP RTRALETYLR VFSAARKQRE ADATASFWRL VTSASRSHYH MWPIKRII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.627 a.118.11 Cytochrome c oxidase subunit E
View Download 0.561 a.24.22 Description not found.
View Download 0.490 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.490 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.465 a.24.9 alpha-catenin/vinculin
View Download 0.453 a.24.17 Group V grass pollen allergen
View Download 0.453 a.24.17 Group V grass pollen allergen
View Download 0.433 a.24.9 alpha-catenin/vinculin
View Download 0.335 a.39.1 EF-hand


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle