| Protein: | AVO2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 426 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AVO2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [4..425] | [397..793] |
|
|
0.0 | [2..424] | [298..728] |
|
|
0.0 | [2..424] | [306..736] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MLKEPSVRLR EAIIEGNLLI VKRLLRRNPD LLTNIDSENG WSSLHYASYH GRYLICVYLI 60
61 QLGHDKHELI KTFKGNTCVH LALMKGHEQT LHLLLQQFPR FIN
|
| Detection Method: |  |
| Confidence: | 91.69897 |
| Match: | 1k1aA_ |
| Description: | bcl-3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.96927469603571 | bayes_pls_golite062009 |
| protein binding | 1.64872738860757 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.918965541481332 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.130000994167231 | bayes_pls_golite062009 |
|
Region A: Residues: [104-229] |
1 11 21 31 41 51
| | | | | |
1 HRGENGRAPI HIACMNDYYQ CLSLLIGVGA DLWVMDTNGD TPLHVCLEYG SISCMKMLLN 60
61 EGEVSLDDNV RDKGNWKPID VAQTFEVGNI YSKVLKEVKK KGPPLGAGKK PSSFRTPILN 120
121 AKATFE
|
| Detection Method: | |
| Confidence: | 91.69897 |
| Match: | 1k1aA_ |
| Description: | bcl-3 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [230-296] |
1 11 21 31 41 51
| | | | | |
1 DGPSPVLSMN SPYSLYSNNS PLPVLPRRIS THTTSGNGGN RRSSITNPVF NPRKPTLSTD 60
61 SFSSSSN
|
| Detection Method: | |
| Confidence: | 15.154902 |
| Match: | 1sw6A_ |
| Description: | Swi6 ankyrin-repeat fragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [297-426] |
1 11 21 31 41 51
| | | | | |
1 SSSRLRVNSI NVKTPVGVSP KKELVSESVR HSATPTSPHN NIALINRYLL PNKSNDNVRG 60
61 DSQTATINDD GGGGNGGDAT IGMGLRKDPD DENENKYKIK VNNGEPRRRV SLLNIPISKL 120
121 RNSNNTRAED
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
