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View Structure Prediction Details

Protein: AEP1
Organism: Saccharomyces cerevisiae
Length: 518 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AEP1.

Description E-value Query
Range
Subject
Range
gi|3349, gi|171036 - gi|3349|emb|CAA40367.1| AEP1 [Saccharomyces cerevisiae], gi|171036|gb|AAA02908.1| AEP1 [Saccharomyce...
0.0 [1..518] [1..518]

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Predicted Domain #1
Region A:
Residues: [1-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITTVQEISK WRNLCFIRMQ SRKWYPVLKK TPLVADGRKI IKHADKVPHP EEIIHPFYQP  60
   61 TAIEQFTACA TEYNPSLLDG KKIAPSLIKH PVSLKTILVD SKLKFDDIRG VNKWLMEFVA 120
  121 RRQHQRNIVL TPASKSVRSF HVLHLSSTDI AKLRGLENIL SEIENTNDLQ SRVESVNNEL 180
  181 QNIFDRDSKQ TRLFCENILA YLIKNYGNST EKLILLINVT EMQLYSRLDQ MKAMNIILYN 240
  241 ILCKVEANEN PPYSPTLVTA LENLLAAINN RFFPGRCENS LHPIVIEQLL SYFIKTGNLN 300
  301 ESKNFLGHLI KKGILPEATI INRYLEAIDV HFDKSTKIFD IRSKFAFIAD LAPIIENYGT 360
  361 IDLFKFLIPM CRHFDELCSL LNIIRKSNNA KRAVDSTLPI FIKKVLTFTK DPMINSGNLS 420
  421 TVFNIVSPIY GQNVPSEFVE KFILSFALQG NYTMMAHMID TYKIKLSHKY QLQIIRALKN 480
  481 SERNHALKNT GAVGYNKEFK KYFIEKYLNC TEREALRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle