YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ARG7
Organism: Saccharomyces cerevisiae
Length: 441 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARG7.

Description E-value Query
Range
Subject
Range
ARG7 - Mitochondrial ornithine acetyltransferase, catalyzes the fifth step in arginine biosynthesis; also p...
ARGJ_YEAS1 - Arginine biosynthesis bifunctional protein ArgJ, mitochondrial OS=Saccharomyces cerevisiae (strain R...
ARGJ_YEAS6 - Arginine biosynthesis bifunctional protein ArgJ, mitochondrial OS=Saccharomyces cerevisiae (strain A...
ARGJ_YEAS2 - Arginine biosynthesis bifunctional protein ArgJ, mitochondrial OS=Saccharomyces cerevisiae (strain J...
ARGJ_YEAS7 - Arginine biosynthesis bifunctional protein ArgJ, mitochondrial OS=Saccharomyces cerevisiae (strain Y...
ARGJ_YEAST - Arginine biosynthesis bifunctional protein ArgJ, mitochondrial OS=Saccharomyces cerevisiae (strain A...
0.0 [1..441] [1..441]
ARGJ_BACAM - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus amyloliquefaciens GN=argJ PE=3 SV=1
ARGJ_BACSU - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus subtilis GN=argJ PE=3 SV=2
gi|221322483 - gi|221322483|ref|ZP_03603777.1| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ...
ARGJ_BACSU - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus subtilis (strain 168) GN=argJ PE=3 SV=2
gi|221318209 - gi|221318209|ref|ZP_03599503.1| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ...
gi|221313285 - gi|221313285|ref|ZP_03595090.1| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ...
0.0 [13..441] [3..406]
ARGJ_GEOSE - Arginine biosynthesis bifunctional protein ArgJ OS=Geobacillus stearothermophilus GN=argJ PE=1 SV=1
0.0 [23..441] [15..410]
ARGJ_THEMA - Arginine biosynthesis bifunctional protein ArgJ OS=Thermotoga maritima GN=argJ PE=3 SV=1
ARGJ_THEMA - Arginine biosynthesis bifunctional protein ArgJ OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
0.0 [28..441] [3..397]
gi|16078185, gi|... - gi|2633457|emb|CAB12961.1| amino-acid acetyltransferase; ornithine acetyltransferase [Bacillus subti...
ARGJ_BACSU - Arginine biosynthesis bifunctional protein argJ OS=Bacillus subtilis GN=argJ PE=3 SV=1
0.0 [13..441] [3..406]
gi|7448559 - pir||S75647 glutamate N-acetyltransferase (EC 2.3.1.35) - Synechocystis sp. (strain PCC 6803)
gi|1653293, gi|1... - gi|1653293|dbj|BAA18208.1| ornithine acetyltransferase [Synechocystis sp. PCC 6803], gi|16330800|ref...
0.0 [22..441] [13..419]
ARGJ_THENE - Arginine biosynthesis bifunctional protein argJ OS=Thermotoga neapolitana GN=argJ PE=1 SV=1
0.0 [29..441] [4..397]
gi|224501470 - gi|224501470|ref|ZP_03669777.1| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ...
ARGJ_LISMO - Arginine biosynthesis bifunctional protein ArgJ OS=Listeria monocytogenes GN=argJ PE=3 SV=1
ARGJ_LISMO - Arginine biosynthesis bifunctional protein ArgJ OS=Listeria monocytogenes serovar 1/2a (strain ATCC ...
0.0 [22..441] [4..398]
ARGJ_LISIN - Arginine biosynthesis bifunctional protein ArgJ OS=Listeria innocua serovar 6a (strain CLIP 11262) G...
ARGJ_LISIN - Arginine biosynthesis bifunctional protein ArgJ OS=Listeria innocua GN=argJ PE=3 SV=1
0.0 [22..441] [4..398]

Back

Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISSTLLQR SKQLIDKYAL YVPKTGSFPK GFEVGYTASG VKKNGSLDLG VILNTNKSRP  60
   61 STAAAVFTTN KFKAAPVLTS KKVLETARGK NINAIVVNSG CANSVTGDLG MKDAQVMIDL 120
  121 VNDKIGQKNS TLVMSTGVIG QRLQMDKIST GINKIFGEEK FGSDFNSWLN VAKSICTTDT 180
  181 FPKLVTSRFK LPSGTEYTLT GMAKGAGMIC PNMATLLGFI VTDLPIESKA LQKMLTFATT 240
  241 RSFNCISVDG DMSTNDTICM LANGAIDTKE INEDSKDFEQ VKLQVTEFAQ RLAQLVVRDG 300
  301 EGSTKFVTVN VKNALHFEDA KIIAESISNS MLVKTALYGQ DANWGRILCA IGYAKLND

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.98
Match: 1b65A
Description: L-aminopeptidase D-Ala-esterase/amidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glutamate N-acetyltransferase activity 7.31583566409397 bayes_pls_golite062009
acetyl-CoA:L-glutamate N-acetyltransferase activity 5.4926416554153 bayes_pls_golite062009
N-acetyltransferase activity 4.96696522207886 bayes_pls_golite062009
N-acyltransferase activity 4.73607169922009 bayes_pls_golite062009
transferase activity, transferring acyl groups 3.68873019774933 bayes_pls_golite062009
acetyltransferase activity 2.5583016526898 bayes_pls_golite062009
catalytic activity 1.79436687732784 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.59037053975861 bayes_pls_golite062009
acyltransferase activity 1.58751303684177 bayes_pls_golite062009
transferase activity 1.00050620701588 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [359-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKSLDVNKIN VSFIATDNSE PRELKLVANG VPQLEIDETR ASEILALNDL EVSVDLGTGD  60
   61 QAAQFWTCDL SHEYVTINGD YRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.521 b.1.18 E set domains
View Download 0.685 b.1.2 Fibronectin type III
View Download 0.653 b.1.3 PKD domain
View Download 0.584 b.7.3 PHL pollen allergen
View Download 0.575 b.3.2 Carboxypeptidase D, a regulatory domain
View Download 0.518 g.18.1 Complement control module/SCR domain
View Download 0.517 d.58.5 GlnB-like
View Download 0.493 d.200.1 Integrin beta tail domain
View Download 0.477 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.475 b.1.1 Immunoglobulin
View Download 0.470 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.465 d.17.5 Uracil-DNA glycosylase inhibitor protein
View Download 0.448 b.36.1 PDZ domain-like
View Download 0.447 d.64.1 eIF1-like
View Download 0.445 c.52.2 tRNA splicing endonuclease, C-terminal domain
View Download 0.434 d.17.2 Copper amine oxidase, domains 1 and 2
View Download 0.428 b.1.1 Immunoglobulin
View Download 0.427 b.1.1 Immunoglobulin
View Download 0.425 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.424 d.17.2 Copper amine oxidase, domains 1 and 2
View Download 0.401 a.4.1 Homeodomain-like
View Download 0.389 b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3
View Download 0.388 b.1.1 Immunoglobulin
View Download 0.382 b.1.2 Fibronectin type III
View Download 0.379 g.18.1 Complement control module/SCR domain
View Download 0.377 d.95.2 Homing endonucleases
View Download 0.367 d.17.2 Copper amine oxidase, domains 1 and 2
View Download 0.357 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.345 b.24.1 Hyaluronate lyase-like, C-terminal domain
View Download 0.344 d.50.1 dsRNA-binding domain-like
View Download 0.337 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.335 d.94.1 HPr-like
View Download 0.332 b.7.2 Periplasmic chaperone C-domain
View Download 0.326 b.115.1 Fucose-binding lectin II (PA-IIL)
View Download 0.304 b.1.1 Immunoglobulin
View Download 0.303 g.18.1 Complement control module/SCR domain
View Download 0.295 d.1.1 Microbial ribonucleases
View Download 0.289 d.237.1 Hypothetical protein YjiA, C-terminal domain
View Download 0.285 b.1.1 Immunoglobulin
View Download 0.284 b.1.2 Fibronectin type III
View Download 0.278 b.50.1 Acid proteases
View Download 0.268 b.1.1 Immunoglobulin
View Download 0.258 b.1.2 Fibronectin type III
View Download 0.234 b.1.18 E set domains
View Download 0.233 d.17.4 NTF2-like
View Download 0.232 b.1.18 E set domains
View Download 0.232 b.1.1 Immunoglobulin
View Download 0.231 b.1.1 Immunoglobulin
View Download 0.226 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain
View Download 0.223 d.24.1 Pili subunits
View Download 0.220 b.7.4 Rab geranylgeranyltransferase alpha-subunit, insert domain
View Download 0.219 c.48.1 TK C-terminal domain-like
View Download 0.218 d.169.1 C-type lectin-like
View Download 0.217 b.12.1 Lipase/lipooxygenase domain (PLAT/LH2 domain)
View Download 0.215 b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.213 b.112.1 C-terminal domain of mollusc hemocyanin
View Download 0.209 b.1.18 E set domains
View Download 0.207 b.24.1 Hyaluronate lyase-like, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle