| Protein: | BUB2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 306 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUB2.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-57 | [4..300] | [127..425] |
|
|
1.0E-55 | [7..286] | [48..315] |
|
|
3.0E-54 | [1..306] | [1..306] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MTSIEDLISN PPLLLHSSLS QLRYLILSEG LPISEDKQQQ RTRCYVWTVL SQTSMEASTQ 60
61 RYLALLKLGP PSTTIYQKIK NDTSRTFQTD PNFRNRVSED ALIRCLSCFA WQTQQRRQKT 120
121 RFGRIPVSTY VQGMNVLLAP LLYSCPSEPM AYQLFTKLCY EMIPTYLTKN LN
|
|
Region B: Residues: [226-234] |
1 11 21 31 41 51
| | | | | |
1 KLWDFMFAY
|
| Detection Method: |  |
| Confidence: | 33.0 |
| Match: | 1fkmA_ |
| Description: | Ypt/Rab-GAP domain of gyp1p |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [173-225] |
1 11 21 31 41 51
| | | | | |
1 GAQNGAKLLD ISLRIIDPKL SKFLSDNLLT AEIYGMPSIL TLSSCNKPLD QVI
|
| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1fkmA_ |
| Description: | Ypt/Rab-GAP domain of gyp1p |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [235-306] |
1 11 21 31 41 51
| | | | | |
1 GFHMNILFVV AFLVKMRSKV FKSDSPVNLL RQFPDFDADE IIRLGVGFIA KIPAQIYDLL 60
61 VDHLTDPDIY IP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
