| Protein: | STV1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 890 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STV1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [7..890] | [4..843] |
|
|
0.0 | [1..890] | [1..890] |
|
|
0.0 | [6..882] | [3..839] |
|
|
0.0 | [4..889] | [13..889] |
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0.0 | [6..887] | [3..844] |
|
|
0.0 | [6..890] | [3..835] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MNQEEAIFRS ADMTYVQLYI PLEVIREVTF LLGKMSVFMV MDLNKDLTAF QRGYVNQLRR 60
61 FDEVERMVGF LNEVVEKHAA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.814 | 0.459 | vacuolar acidification | a.39.1 | EF-hand |
| View | Download | 0.692 | 0.459 | vacuolar acidification | a.77.1 | DEATH domain |
| View | Download | 0.793 | 0.459 | vacuolar acidification | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.722 | 0.459 | vacuolar acidification | a.112.1 | Description not found. |
| View | Download | 0.669 | 0.459 | vacuolar acidification | c.47.1 | Thioredoxin-like |
| View | Download | 0.628 | 0.459 | vacuolar acidification | a.77.1 | DEATH domain |
| View | Download | 0.620 | 0.459 | vacuolar acidification | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.613 | 0.459 | vacuolar acidification | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.585 | 0.459 | vacuolar acidification | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.568 | 0.459 | vacuolar acidification | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.555 | 0.459 | vacuolar acidification | a.39.1 | EF-hand |
| View | Download | 0.523 | 0.459 | vacuolar acidification | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.514 | 0.459 | vacuolar acidification | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.504 | 0.459 | vacuolar acidification | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.495 | 0.459 | vacuolar acidification | c.15.1 | BRCT domain |
| View | Download | 0.492 | 0.459 | vacuolar acidification | a.64.1 | Saposin |
| View | Download | 0.490 | 0.459 | vacuolar acidification | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.486 | 0.459 | vacuolar acidification | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.482 | 0.459 | vacuolar acidification | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.464 | 0.459 | vacuolar acidification | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.459 | 0.459 | vacuolar acidification | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.457 | 0.459 | vacuolar acidification | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.456 | 0.459 | vacuolar acidification | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.430 | 0.459 | vacuolar acidification | a.101.1 | Uteroglobin-like |
| View | Download | 0.427 | 0.459 | vacuolar acidification | d.58.17 | Metal-binding domain |
| View | Download | 0.425 | 0.459 | vacuolar acidification | d.120.1 | Cytochrome b5 |
| View | Download | 0.414 | 0.459 | vacuolar acidification | a.60.1 | SAM/Pointed domain |
| View | Download | 0.407 | 0.459 | vacuolar acidification | a.101.1 | Uteroglobin-like |
| View | Download | 0.403 | 0.459 | vacuolar acidification | d.94.1 | HPr-like |
| View | Download | 0.398 | 0.459 | vacuolar acidification | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.393 | 0.459 | vacuolar acidification | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.385 | 0.459 | vacuolar acidification | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.383 | 0.459 | vacuolar acidification | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.382 | 0.459 | vacuolar acidification | d.41.2 | Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain |
| View | Download | 0.382 | 0.459 | vacuolar acidification | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.380 | 0.459 | vacuolar acidification | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.379 | 0.459 | vacuolar acidification | a.101.1 | Uteroglobin-like |
| View | Download | 0.378 | 0.459 | vacuolar acidification | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.377 | 0.459 | vacuolar acidification | a.39.1 | EF-hand |
| View | Download | 0.376 | 0.459 | vacuolar acidification | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.374 | 0.459 | vacuolar acidification | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.363 | 0.459 | vacuolar acidification | a.101.1 | Uteroglobin-like |
| View | Download | 0.358 | 0.459 | vacuolar acidification | a.3.1 | Cytochrome c |
| View | Download | 0.355 | 0.459 | vacuolar acidification | a.4.1 | Homeodomain-like |
| View | Download | 0.354 | 0.459 | vacuolar acidification | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.353 | 0.459 | vacuolar acidification | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.353 | 0.459 | vacuolar acidification | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.352 | 0.459 | vacuolar acidification | d.58.5 | GlnB-like |
| View | Download | 0.350 | 0.459 | vacuolar acidification | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.344 | 0.459 | vacuolar acidification | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.343 | 0.459 | vacuolar acidification | d.94.1 | HPr-like |
| View | Download | 0.339 | 0.459 | vacuolar acidification | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.333 | 0.459 | vacuolar acidification | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.332 | 0.459 | vacuolar acidification | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.332 | 0.459 | vacuolar acidification | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.327 | 0.459 | vacuolar acidification | a.46.1 | Methionine synthase domain |
| View | Download | 0.327 | 0.459 | vacuolar acidification | d.58.12 | eEF-1beta-like |
| View | Download | 0.319 | 0.459 | vacuolar acidification | a.144.1 | PABC (PABP) domain |
| View | Download | 0.318 | 0.459 | vacuolar acidification | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.318 | 0.459 | vacuolar acidification | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.318 | 0.459 | vacuolar acidification | a.39.1 | EF-hand |
| View | Download | 0.317 | 0.459 | vacuolar acidification | a.156.1 | S13-like H2TH domain |
| View | Download | 0.317 | 0.459 | vacuolar acidification | d.58.17 | Metal-binding domain |
| View | Download | 0.313 | 0.459 | vacuolar acidification | d.58.17 | Metal-binding domain |
| View | Download | 0.313 | 0.459 | vacuolar acidification | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.313 | 0.459 | vacuolar acidification | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.310 | 0.459 | vacuolar acidification | a.156.1 | S13-like H2TH domain |
| View | Download | 0.308 | 0.459 | vacuolar acidification | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.308 | 0.459 | vacuolar acidification | a.60.1 | SAM/Pointed domain |
| View | Download | 0.307 | 0.459 | vacuolar acidification | a.1.1 | Globin-like |
| View | Download | 0.304 | 0.459 | vacuolar acidification | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.303 | 0.459 | vacuolar acidification | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.301 | 0.459 | vacuolar acidification | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.300 | 0.459 | vacuolar acidification | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.300 | 0.459 | vacuolar acidification | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.298 | 0.459 | vacuolar acidification | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| View | Download | 0.297 | 0.459 | vacuolar acidification | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.295 | 0.459 | vacuolar acidification | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.293 | 0.459 | vacuolar acidification | a.4.1 | Homeodomain-like |
| View | Download | 0.292 | 0.459 | vacuolar acidification | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.292 | 0.459 | vacuolar acidification | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.291 | 0.459 | vacuolar acidification | a.39.1 | EF-hand |
| View | Download | 0.284 | 0.459 | vacuolar acidification | a.39.1 | EF-hand |
| View | Download | 0.279 | 0.459 | vacuolar acidification | d.94.1 | HPr-like |
| View | Download | 0.278 | 0.459 | vacuolar acidification | d.15.1 | Ubiquitin-like |
| View | Download | 0.278 | 0.459 | vacuolar acidification | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.275 | 0.459 | vacuolar acidification | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.275 | 0.459 | vacuolar acidification | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.275 | 0.459 | vacuolar acidification | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.274 | 0.459 | vacuolar acidification | a.101.1 | Uteroglobin-like |
| View | Download | 0.270 | 0.459 | vacuolar acidification | d.201.1 | SRP19 |
| View | Download | 0.267 | 0.459 | vacuolar acidification | a.118.14 | FliG |
| View | Download | 0.264 | 0.459 | vacuolar acidification | a.4.12 | TrpR-like |
| View | Download | 0.263 | 0.459 | vacuolar acidification | d.58.12 | eEF-1beta-like |
| View | Download | 0.259 | 0.459 | vacuolar acidification | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.258 | 0.459 | vacuolar acidification | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.253 | 0.459 | vacuolar acidification | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.252 | 0.459 | vacuolar acidification | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.251 | 0.459 | vacuolar acidification | c.23.1 | CheY-like |
| View | Download | 0.244 | 0.459 | vacuolar acidification | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.244 | 0.459 | vacuolar acidification | d.58.2 | Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |
| View | Download | 0.241 | 0.459 | vacuolar acidification | d.94.1 | HPr-like |
| View | Download | 0.237 | 0.459 | vacuolar acidification | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.236 | 0.459 | vacuolar acidification | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.232 | 0.459 | vacuolar acidification | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.231 | 0.459 | vacuolar acidification | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.226 | 0.459 | vacuolar acidification | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.224 | 0.459 | vacuolar acidification | d.26.1 | FKBP-like |
| View | Download | 0.224 | 0.459 | vacuolar acidification | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.224 | 0.459 | vacuolar acidification | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.222 | 0.459 | vacuolar acidification | a.77.1 | DEATH domain |
| View | Download | 0.220 | 0.459 | vacuolar acidification | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.220 | 0.459 | vacuolar acidification | a.118.14 | FliG |
| View | Download | 0.220 | 0.459 | vacuolar acidification | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.218 | 0.459 | vacuolar acidification | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.217 | 0.459 | vacuolar acidification | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.217 | 0.459 | vacuolar acidification | d.74.4 | Prokaryotic AspRS, insert domain |
| View | Download | 0.214 | 0.459 | vacuolar acidification | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.212 | 0.459 | vacuolar acidification | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.211 | 0.459 | vacuolar acidification | d.40.1 | CI-2 family of serine protease inhibitors |
| View | Download | 0.211 | 0.459 | vacuolar acidification | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.206 | 0.459 | vacuolar acidification | a.118.14 | FliG |
| View | Download | 0.205 | 0.459 | vacuolar acidification | c.47.1 | Thioredoxin-like |
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Region A: Residues: [81-408] |
1 11 21 31 41 51
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1 ETWKYILHID DEGNDIAQPD MADLINTMEP LSLENVNDMV KEITDCESRA RQLDESLDSL 60
61 RSKLNDLLEQ RQVIFECSKF IEVNPGIAGR ATNPEIEQEE RDVDEFRMTP DDISETLSDA 120
121 FSFDDETPQD RGALGNDLTR NQSVEDLSFL EQGYQHRYMI TGSIRRTKVD ILNRILWRLL 180
181 RGNLIFQNFP IEEPLLEGKE KVEKDCFIIF THGETLLKKV KRVIDSLNGK IVSLNTRSSE 240
241 LVDTLNRQID DLQRILDTTE QTLHTELLVI HDQLPVWSAM TKREKYVYTT LNKFQQESQG 300
301 LIAEGWVPST ELIHLQDSLK DYIETLGS
|
| Detection Method: | |
| Confidence: | 22.221849 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [409-890] |
1 11 21 31 41 51
| | | | | |
1 EYSTVFNVIL TNKLPPTYHR TNKFTQAFQS IVDAYGIATY KEINAGLATV VTFPFMFAIM 60
61 FGDMGHGFIL FLMALFLVLN ERKFGAMHRD EIFDMAFTGR YVLLLMGAFS VYTGLLYNDI 120
121 FSKSMTIFKS GWQWPSTFRK GESIEAKKTG VYPFGLDFAW HGTDNGLLFS NSYKMKLSIL 180
181 MGYAHMTYSF MFSYINYRAK NSKVDIIGNF IPGLVFMQSI FGYLSWAIVY KWSKDWIKDD 240
241 KPAPGLLNML INMFLAPGTI DDQLYSGQAK LQVVLLLAAL VCVPWLLLYK PLTLRRLNKN 300
301 GGGGRPHGYQ SVGNIEHEEQ IAQQRHSAEG FQGMIISDVA SVADSINESV GGGEQGPFNF 360
361 GDVMIHQVIH TIEFCLNCIS HTASYLRLWA LSLAHAQLSS VLWDMTISNA FSSKNSGSPL 420
421 AVMKVVFLFA MWFVLTVCIL VFMEGTSAML HALRLHWVEA MSKFFEGEGY AYEPFSFRAI 480
481 IE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
