| Protein: | MIH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 554 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIH1.
| Description | E-value | Query Range |
Subject Range |
|
|
540.0 | [0..1] | [474..1] |
|
|
358.0 | [0..50] | [415..188] |
|
|
356.0 | [0..46] | [414..131] |
|
|
341.0 | [0..81] | [414..81] |
|
|
335.0 | [0..81] | [414..129] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MNNIFHGTED ECANEDVLSF QKISLKSPFG KKKNIFRNVQ TFFKSKSKHS NVDDDLINKE 60
61 NLAFDK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.802 | a.4.1 | Homeodomain-like |
| View | Download | 0.802 | a.4.1 | Homeodomain-like |
| View | Download | 0.599 | a.230.1 | Description not found. |
| View | Download | 0.584 | a.159.4 | Description not found. |
| View | Download | 0.570 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.570 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.566 | a.230.1 | Description not found. |
| View | Download | 0.536 | a.74.1 | Cyclin-like |
| View | Download | 0.535 | f.14.1 | Voltage-gated potassium channels |
|
Region A: Residues: [67-176] |
1 11 21 31 41 51
| | | | | |
1 SPLLTNHRSK EIDGPSPNIK QLGHRDELDE NENENDDIVL SMHFASQTLQ SPTRNSSRRS 60
61 LTNNRDNDLL SRIKYPGSPQ RSSSFSRSRS LSRKPSMNSS SNSSRRVQRQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.481 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.481 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.461 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.461 | N/A | N/A | a.118.21 | Description not found. |
| View | Download | 0.414 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.405 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.325 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.290 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.262 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [177-456] |
1 11 21 31 41 51
| | | | | |
1 DGKIPRSSRK SSQKFSNITQ NTLNFTSASS SPLAPNSVGV KCFESCLAKT QIPYYYDDRN 60
61 SNDFFPRISP ETLKNILQNN MCESFYNSCR IIDCRFEYEY TGGHIINSVN IHSRDELEYE 120
121 FIHKVLHSDT SNNNTLPTLL IIHCEFSSHR GPSLASHLRN CDRIINQDHY PKLFYPDILI 180
181 LDGGYKAVFD NFPELCYPRQ YVGMNSQENL LNCEQEMDKF RRESKRFATK NNSFRKLASP 240
241 SNPNFFYRDS HQSSTTMASS ALSFRFEPPP KLSLNHRRVS
|
| Detection Method: | |
| Confidence: | 279.54902 |
| Match: | 1cwrA |
| Description: | CDC25b |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [457-554] |
1 11 21 31 41 51
| | | | | |
1 SGSSLNSSES TGDENFFPIL SKSSMSSNSN LSTSHMLLMD GLDTPSYFSF EDERGNHQQV 60
61 SGDEEQDGDF TFVGSDREDL PRPARRSLFP SLETEDKK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.555 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.486 | d.82.2 | Frataxin-like |
| View | Download | 0.393 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.388 | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.388 | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.376 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.370 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.356 | a.42.1 | MDM2 |
| View | Download | 0.350 | b.34.2 | SH3-domain |
| View | Download | 0.348 | a.1.1 | Globin-like |
