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View Structure Prediction Details

Protein: CSI1
Organism: Saccharomyces cerevisiae
Length: 295 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSI1.

Description E-value Query
Range
Subject
Range
gi|190408264 - gi|190408264|gb|EDV11529.1| interactor with COP9 signalosome complex [Saccharomyces cerevisiae RM11-...
CSI1 - Subunit of the Cop9 signalosome, which is required for deneddylation, or removal of the ubiquitin-li...
gi|207342417 - gi|207342417|gb|EDZ70190.1| YMR025Wp-like protein [Saccharomyces cerevisiae AWRI1631]
CSI1_YEAST - Cop9 signalosome-interactor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSI1 PE=1 ...
0.0 [1..295] [1..295]

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Predicted Domain #1
Region A:
Residues: [1-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLKFSSLA ISEINFLHES SFDSIDHSWF LLIGCKLDQD DEIYIPINGN EAESQWYIEK  60
   61 VIRIPMQEND KINQERLERR INLTKVTQKD ICILGILDLC QLEEDENITN KVTEKVLTQL 120
  121 TALALKYLIK YNVFRQHTSF QEAVNSLKGY KIENSVQIGA EIILDFLQDK VQIKDVNDRY 180
  181 QIPTPNNTVD PGFDEFQLID MKDKEINIQK YNNNTIRKLL EKINRMIIFL KNYDATDKPF 240
  241 SSTQDVILRK ISMLVTQLQR GGTSDMNYLL DNKINEIKLL EISCKQWEIS NMLKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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