Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR018W.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..4] | [496..56] |
|
|
280.0 | [0..9] | [490..49] |
|
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280.0 | [0..9] | [490..49] |
|
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278.0 | [0..21] | [472..164] |
|
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278.0 | [0..9] | [493..49] |
|
|
277.0 | [0..21] | [490..17] |
|
|
277.0 | [0..9] | [490..49] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MNEVTCSITG DNPIHKINNG LGLKWNNLGK FSDFQTNDSA ARDARTIDYI FTNCQTGSSI 60
61 GKIDFRAALP ADKSQHSG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.609 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.598 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.598 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.557 | N/A | N/A | d.145.1 | FAD-binding domain |
| View | Download | 0.557 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.557 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.553 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.553 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.552 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.520 | N/A | N/A | b.3.2 | Carboxypeptidase D, a regulatory domain |
|
Region A: Residues: [79-153] |
1 11 21 31 41 51
| | | | | |
1 VSEKEFSRLE NQWSKEFSCF PKNKNADVTK PSRNKHEKRS ANLHNRYFAQ YYSTAYQQNR 60
61 IYPCRISYNE HSSVS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.636 | a.2.7 | tRNA-binding arm |
| View | Download | 0.636 | a.2.7 | tRNA-binding arm |
| View | Download | 0.615 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.423 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.423 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.423 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.423 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.417 | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.403 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
|
Region A: Residues: [154-301] |
1 11 21 31 41 51
| | | | | |
1 NGWEFQFKSI ENQLLNELKI ENNVEEKTVG YEYVAEYEET IDFMHMLSSV PQTYQFLKSN 60
61 IYITERDPYK IGCVLMDNGS NLNEVVMAFE AAISQDPSHI NAWLKLGIVN FENESESNGE 120
121 LALRNCLNLD PNNTIALENL AIHHINQQ
|
| Detection Method: | |
| Confidence: | 315.594777 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [302-374] |
1 11 21 31 41 51
| | | | | |
1 NESESLKLFH KWILSKFSKV FQPSAGENKD SINKIPKKAH LAHILESLLN MGIEKKDQYD 60
61 IYSVLSILYY SDQ
|
| Detection Method: | |
| Confidence: | 315.594777 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [375-434] |
1 11 21 31 41 51
| | | | | |
1 KIKQSQKCLE FLLLEKPNNG TIWNRYGAIL ANTKSYHSAI NAYNKCKQLR PNFTRVRYNL 60
61
|
| Detection Method: | |
| Confidence: | 315.594777 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [435-514] |
1 11 21 31 41 51
| | | | | |
1 AIAYMNKGDY VKASKMLIEV ILLRSKGYEH NKAKMQNKFM QNLKNALIAS KNFDSLDLIN 60
61 GSHNTESLIS TLKAIYNKMD
|
| Detection Method: | |
| Confidence: | 315.594777 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
