| Protein: | SPO20 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 397 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO20.
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..1] | [397..1] |
|
|
229.0 | [0..163] | [375..3] |
|
|
224.0 | [0..132] | [392..7] |
|
|
224.0 | [0..132] | [393..7] |
|
|
223.0 | [0..163] | [394..3] |
|
|
222.0 | [0..163] | [394..3] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MGFRKILASK SHHSRHHNQH HKNLKLQNHR YVLISNITGS HETKYLSPFR MDNCSGSRRR 60
61 DRLHVKLKSL RNKIHKQLHP NCRFDDATKT SDDKCVSYEV PERDGLATIS LEEVFPKSNR 120
121 CQIPEENLGE TDSVIHRDLG NFANEND
|
| Detection Method: |  |
| Confidence: | 1.13 |
| Match: | 2jpiA |
| Description: | No description for 2jpiA was found. |
|
Region A: Residues: [148-262] |
1 11 21 31 41 51
| | | | | |
1 YPQWRKVESQ YNLENVQPEE DEIVDRLRSE IRSTKLKSVK TTSRTLEKAI EARCTGKRVL 60
61 QQLSCQSNQL TKIESNCDML KIQSNVADRK IDELAHENRS LLALKSPNPF RKKRE
|
| Detection Method: | |
| Confidence: | 20.39794 |
| Match: | 1jthA |
| Description: | Synaptosomal-assosiated protein SNAP-25 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [263-397] |
1 11 21 31 41 51
| | | | | |
1 REKRDQIYNL KLKHRHLQQE TMKRAQDSDK NLAINLSSEY GRYGQGVERQ RILRDAQKYQ 60
61 FEADEEDNQM EIDLYGNLEQ IKAVSGDLKI MAHAFGREFE AQNTRMFDIE NNVQQADNAL 120
121 QAKRYRLEKV IGKRW
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 1sfcD |
| Description: | Synaptosomal-assosiated protein SNAP-25 |
Matching Structure (courtesy of the PDB): |
|
