| Protein: | PLB1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 664 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLB1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..664] | [1..664] |
|
|
0.0 | [6..664] | [7..649] |
|
|
0.0 | [5..586] | [8..589] |
|
|
0.0 | [17..624] | [7..607] |
|
|
0.0 | [8..599] | [44..628] |
|
|
0.0 | [6..633] | [1..603] |
|
Region A: Residues: [1-364] |
1 11 21 31 41 51
| | | | | |
1 MKLQSLLVSA AVLTSLTENV NAWSPNNSYV PANVTCDDDI NLVREASGLS DNETEWLKKR 60
61 DAYTKEALHS FLNRATSNFS DTSLLSTLFG SNSSNMPKIA VACSGGGYRA MLSGAGMLAA 120
121 MDNRTDGANE HGLGGLLQGA TYLAGLSGGN WLTSTLAWNN WTSVQAIVDN TTESNSIWDI 180
181 SHSILTPDGI NIFKTGSRWD DISDDVQDKK DAGFNISLAD VWGRALAYNF WPSLHRGGVG 240
241 YTWSTLREAD VFKNGEMPFP ITVADGRYPG TTVINLNATL FEFNPFEMGS WDPTLNAFTD 300
301 VKYLGTNVTN GKPVNKGQCI AGFDNTGFIT ATSSTLFNQF LLRLNSTDLP SFIANLATDF 360
361 LEDL
|
| Detection Method: |  |
| Confidence: | 189.927757 |
| Match: | 1cjyA_ |
| Description: | Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [365-592] |
1 11 21 31 41 51
| | | | | |
1 SDNSDDIAIY APNPFKEANF LQKNATSSII ESEYLFLVDG GEDNQNIPLV PLLQKERELD 60
61 VIFALDNSAD TDDYWPDGAS LVNTYQRQFG SQGLNLSFPY VPDVNTFVNL GLNKKPTFFG 120
121 CDARNLTDLE YIPPLIVYIP NSRHSFNGNQ STFKMSYSDS ERLGMIKNGF EAATMGNFTD 180
181 DSDFLGCVGC AIIRRKQQNL NATLPSECSQ CFTNYCWNGT IDSRSVSG
|
| Detection Method: | |
| Confidence: | 13.48 |
| Match: | 1cjyA |
| Description: | Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [593-664] |
1 11 21 31 41 51
| | | | | |
1 VGNDDYSSSA SLSASAAAAS ASASASASAS ASASGSSTHK KNAGNALVNY SNLNTNTFIG 60
61 VLSVISAVFG LI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.537 | a.77.1 | DEATH domain |
| View | Download | 0.623 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.444 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.366 | d.95.2 | Homing endonucleases |
| View | Download | 0.355 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.351 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.348 | a.77.1 | DEATH domain |
| View | Download | 0.344 | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.339 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.337 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.333 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.289 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.286 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.286 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.285 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.272 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.269 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.267 | d.48.1 | RecA protein, C-terminal domain |
| View | Download | 0.263 | a.3.1 | Cytochrome c |
| View | Download | 0.262 | a.2.7 | tRNA-binding arm |
| View | Download | 0.259 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.256 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.255 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.254 | d.58.14 | Ribosomal protein S6 |
| View | Download | 0.252 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.251 | d.64.1 | eIF1-like |
| View | Download | 0.239 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.235 | d.58.25 | Killer toxin KP6 alpha-subunit |
| View | Download | 0.234 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.233 | a.112.1 | Description not found. |
| View | Download | 0.230 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.230 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.228 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.226 | a.3.1 | Cytochrome c |
| View | Download | 0.225 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.224 | d.58.5 | GlnB-like |
| View | Download | 0.222 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.218 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.218 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.209 | a.118.14 | FliG |
| View | Download | 0.207 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.205 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.202 | d.58.49 | YajQ-like |
| View | Download | 0.202 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.201 | a.4.5 | "Winged helix" DNA-binding domain |
