| Protein: | MVP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 511 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MVP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..511] | [1..511] |
|
|
2.0E-77 | [4..506] | [18..520] |
|
|
3.0E-77 | [4..506] | [18..521] |
|
|
5.0E-76 | [6..467] | [104..592] |
|
|
6.0E-67 | [48..506] | [6..473] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MDNYEGSDPW NTSSNAWTKD DDHVVSTTNS EPSLNGISGE FNTLNFSTPL DTNEEDTGFL 60
61 PTNDVLEESI WDDSRNPLGA TGMS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [85-243] |
1 11 21 31 41 51
| | | | | |
1 QTPNIAANET VIDKNDARDQ NIEESEADLL DWTNNVRKTY RPLDADIIII EEIPEREGLL 60
61 FKHANYLVKH LIALPSTSPS EERTVVRRYS DFLWLREILL KRYPFRMIPE LPPKRIGSQN 120
121 ADQLFLKKRR IGLSRFINLV MKHPKLSNDD LVLTFLTVR
|
| Detection Method: | |
| Confidence: | 14.154902 |
| Match: | 1h6hA_ |
| Description: | p40phox NADPH oxidase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [244-307] |
1 11 21 31 41 51
| | | | | |
1 TDLTSWRKQA TYDTSNEFAD KKISQEFMKM WKKEFAEQWN QAASCIDTSM ELWYRITLLL 60
61 ERHE
|
|
Region B: Residues: [431-511] |
1 11 21 31 41 51
| | | | | |
1 EYDRIKKIIQ KDRRSIIEQS NRAWLIRQCI LEEFTIFQET QFLITRAFQD WAKLNSNHAG 60
61 LKLNEWEKLV TSIMDMPISR E
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1dg3A_ |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [308-430] |
1 11 21 31 41 51
| | | | | |
1 KRIMQMVHER NFFETLVDNF SEVTPKLYPV QQNDTILDIN NNLSIIKKHL ETTSSICKQE 60
61 TEEISGTLSP KFKIFTDILL SLRSLFERYK IMAANNVVEL QRHVELNKEK LESMKGKPDV 120
121 SGA
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1dg3A_ |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
