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View Structure Prediction Details

Protein: AIM34
Organism: Saccharomyces cerevisiae
Length: 198 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM34.

Description E-value Query
Range
Subject
Range
gi|49641601 - gi|49641601|emb|CAH01319.1| KLLA0C06072p [Kluyveromyces lactis]
AIM34_KLULA - Altered inheritance of mitochondria protein 34, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8...
55.0 [0..46] [171..35]
AIM34_ASHGO - Altered inheritance of mitochondria protein 34, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 ...
gi|44981432, gi|... - gi|45185677|ref|NP_983393.1| ACL011Cp [Ashbya gossypii ATCC 10895], gi|44981432|gb|AAS51217.1| ACL01...
55.0 [0..46] [100..49]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISLLGRIV SQQFSGIRAA EPGRSLYLPF TLLLKQPGAY KVSLHRYVHS TQTKSHLSFL  60
   61 MNNNDITPFQ KFTVKVLKEQ CKSRGLKLSG RKSDLLQRLI THDSCS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.38
Match: 2do1A
Description: No description for 2do1A was found.

Predicted Domain #2
Region A:
Residues: [107-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKKSSVKINE PKKKRILIND PIKITKKLVS DKTFRTIEKN ISSLQNTPVI ETPCDVHSHL  60
   61 QPRDRIFLLG FFMLSCLWWN LEPQESKPTI DH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle