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View Structure Prediction Details

Protein: YML116W-A
Organism: Saccharomyces cerevisiae
Length: 100 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YML116W-A.

Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQQITERR REDLLQGIER YQDLTSWPNT LHKCNIRHLC MQPIFWAPLR KTTRILTSSI  60
   61 AVLSLKYNAY PSDYLDKAQG SLRRPAKVFL PFFLRFLCIN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.531 a.69.1 C-terminal domain of alpha and beta subunits of F1 ATP synthase
View Download 0.503 a.24.9 alpha-catenin/vinculin
View Download 0.499 a.8.2 Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
View Download 0.493 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.425 a.134.1 Fungal elicitin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle