| Protein: | ZDS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 942 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZDS2.
| Description | E-value | Query Range |
Subject Range |
|
|
1470.0 | [0..1] | [913..1] |
|
|
1201.0 | [0..136] | [883..4] |
|
|
381.0 | [0..42] | [912..67] |
|
|
349.0 | [0..48] | [911..4] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MVLMEDMQNK DGHNTVENSS GGTDSNNNIQ MRRMRKTQLS KKELFEKRKS DVLIAAKSLD 60
61 TEIQNVKNLK RLSIGSMDLV IDPELEFKVN SRNSYSSDSS KESLQESLHE ENIIRSEQKE 120
121 EQGSEDNDAY E
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.456 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.407 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.407 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.394 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.394 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.368 | d.107.1 | Ran-binding protein mog1p |
| View | Download | 0.365 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.313 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.240 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.218 | b.60.1 | Lipocalins |
|
Region A: Residues: [132-516] |
1 11 21 31 41 51
| | | | | |
1 EGDATNVDDS IDITQTEYLH DEETLEKEKI IRNASSSTSS SARVTSRNRR LSGVKTLAHD 60
61 VVLDVENDHD SKMVDLTQNL LWVPADQHPN VKPENYLELI QDTLQNIQIS TNQDIDENKL 120
121 ELGNNHVISN RKRTGSVVRR PSRLKTSYTK FDDEPPLADK PQEGEIQVDK RISSSDIKTI 180
181 RSVSLKEITE ELTKISNNAG LTDSDAVTLA RSLSMSGSFT NESLHLNGNH TENDNEFASN 240
241 MFNETGLTIP ERSSLRRSKF NTYKIRLEGS SLPQAVKLNS LMNIQTNDNR RSASSPASYT 300
301 QVPQEQASLN DFHEIFDHYR RTSTDWSTEN EKYVDSTNYY SDEEDLTHAS ISQESSLLST 360
361 DSSNNSVLIK PHNTGSMISE KLDQH
|
| Detection Method: | |
| Confidence: | 11.32 |
| Match: | |
| Description: | No description for 1jv2B was found. |
|
Region A: Residues: [517-600] |
1 11 21 31 41 51
| | | | | |
1 VSSSEKSNTN NSEANHGWSW LNSSNGSLNA NEQTYQQLTD DEDDEECVDN EKADFVNLSV 60
61 SRRAKSTKRA SERINHSKNR HSPI
|
| Detection Method: | |
| Confidence: | 11.32 |
| Match: | |
| Description: | No description for 1jv2B was found. |
|
Region A: Residues: [601-819] |
1 11 21 31 41 51
| | | | | |
1 FQIHSEEAKS VVITPSVVSS SESQPSKPTA PAVVEKKVEL PTDTQASTHK KNSLEKRLAK 60
61 LFKRKQHNGT CKSDVKVIKK SVKKELKKKA SHSSLSKFRK SPKKKPQEAE VERPSSPTKT 120
121 ITTEDIDTAS VIEPEVRSSN ASTLLPDSHT SHSSEFVVET ISELDGDDSF DISGGDVNYD 180
181 VEVHSSISRD TTAGLEEDIG AEREDNTSPT APQISTLPP
|
| Detection Method: | |
| Confidence: | 13.87 |
| Match: | |
| Description: | No description for 1m2vB was found. |
|
Region A: Residues: [820-942] |
1 11 21 31 41 51
| | | | | |
1 RKLTFEDVVK PDYSNAPIKF TDSAFGFPLP MITNSTVIMF DHRLGINVER AIYRLSHLKL 60
61 SDPGRELRQQ VLLSNFMYSY LNLVNHTLYM EQVGTGDIAF NGDSALGMMD KNDSDGTILI 120
121 PDI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.632 | a.29.13 | Description not found. |
| View | Download | 0.555 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.528 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.528 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.511 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.511 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.505 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.482 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.473 | a.22.1 | Histone-fold |
| View | Download | 0.463 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
