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View Structure Prediction Details

Protein: YML094C-A
Organism: Saccharomyces cerevisiae
Length: 133 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YML094C-A.

Description E-value Query
Range
Subject
Range
gi|832920 - gi|832920|emb|CAA26432.1| unnamed protein product [Saccharomyces cerevisiae]
235.0 [0..2] [133..1]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTMNFLLST ILPGMYNDAD AGTSSFCPSF PAWETVLISS IHSVNLPLAM VNACKDCVKC  60
   61 CNSWSNCCFT AFSCSGFSLV KSTKFRTCSN LKVSKVSVRW QQRRSYSFTY FFERTWLDFY 120
  121 SALSCLGHSK IFI

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.605 a.74.1 Cyclin-like
View Download 0.567 a.74.1 Cyclin-like
View Download 0.539 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.524 a.47.2 t-snare proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle