| Protein: | UFO1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 668 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UFO1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..668] | [1..668] |
|
|
3.0E-51 | [8..307] | [203..507] |
|
|
3.0E-51 | [8..307] | [201..505] |
|
|
1.0E-50 | [8..307] | [892..1199] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MERPGLVLQD LPPEILINIF SHLDEKDLFT LQELSTHFRN LIHDEELWKN LFKSRVHTTH 60
61 FPTFSQSSKF SVEYIERTRG LHHWQHNKAI RTKYTIIPTR NW
|
| Detection Method: |  |
| Confidence: | 14.221849 |
| Match: | 1fs2A_ |
| Description: | Skp2; Cyclin A/CDK2-associated p19, Skp2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [103-349] |
1 11 21 31 41 51
| | | | | |
1 DQPSIERIVF DYPRVAAYND GTITILQLQN HKRQKKFKKL IYIPCTTPQG CSTMDFNINA 60
61 AVFGRFDGRV FGKLLSNKSY LTPVMEFTGR HSAGVTAICN SESWDTSRED WSVSGSENGE 120
121 IIWWCENKLV KMWKVSNRVI WKLAFFKDWT LIMDDEKLYI IHQMQELHSI DIPKDLDEQP 180
181 MRVRFFKMDF GSMTLVLADL NNVYTISVNP NGNFGNLRKL EMPEQICAVE IDEKTSQREQ 240
241 NWQFAGD
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [350-668] |
1 11 21 31 41 51
| | | | | |
1 DGCYISLLTT QNTLYIINIR DLSSSGLKVQ CKISFDEQVY VSQVTNLIVV VALPNVLQIL 60
61 NAMTGELIKT VLKTEKFPEF LKVSQDKIIM GSGNVLNYLK FVSSDSKKHH HSTKGKNTVS 120
121 NKWNETLNTE LQYYDEDEDL RRKRQSEISR LIDAYGGDLE LSGDTDEEND IQLRIALLES 180
181 QEAQARNQAE AGEPVGDDED EQLRRALEES QLIYETQTNS SANHGNNTND EIDEDDEEFL 240
241 RAIRQSRVED ERRRHLRNHT TGRRNGPLSD DNFATYGAAE SSERTSTENT IGSSVGVDAS 300
301 NNVDEDLQLA IALSLSEIN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
