| Protein: | TDA9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1251 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TDA9.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [45..1247] | [135..1377] |
|
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0.0 | [2..416] | [347..800] |
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|
0.0 | [2..405] | [430..844] |
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0.0 | [2..421] | [204..637] |
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Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MSSEEFKGLP IKRDISSTIY ADRPPALSAP PCVGATGNDK IQVLPIPKKS RTIKTDKPRP 60
61 FLCHICTRGF VRQEHLKRHQ RAHTNEKPFL CVFCGRCFAR RDLVLRHQHK LHSALVSKES 120
121 INSKDKTEID AINDKNIIQI QGNKQTILPT PSNPL
|
| Detection Method: |  |
| Confidence: | 189.927757 |
| Match: | 2adr__ |
| Description: | ADR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [156-217] |
1 11 21 31 41 51
| | | | | |
1 AKTAVQLKKA AKEKKNGKQG KLDLSPSYGA NNHSTDVSPS VGNSSTPAVI EETDSSSHFP 60
61 LP
|
| Detection Method: | |
| Confidence: | 3.0 |
| Match: | 2drpA_ |
| Description: | Tramtrack protein (two zinc-finger peptide) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [218-275] |
1 11 21 31 41 51
| | | | | |
1 DTNIPTKSKR HASFSASSAF TYSSDNFQKL HQQAKSDFDE LQESIPHQVG FSTPQLTA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.525 | 0.573 | nucleus | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.445 | 0.000 | nucleus | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.421 | 0.000 | nucleus | d.58.49 | YajQ-like |
| View | Download | 0.414 | N/A | N/A | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.391 | N/A | N/A | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.361 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.347 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.344 | N/A | N/A | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.318 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.312 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.305 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.293 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.276 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.270 | N/A | N/A | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.268 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.264 | N/A | N/A | a.101.1 | Uteroglobin-like |
| View | Download | 0.262 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.255 | N/A | N/A | a.161.1 | beta-catenin-interacting protein ICAT |
| View | Download | 0.250 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.238 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.231 | N/A | N/A | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.230 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.224 | N/A | N/A | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.223 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.218 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
|
Region A: Residues: [276-404] |
1 11 21 31 41 51
| | | | | |
1 QQLIENAIES GVVDLETLDL PPFLSLDGLP PASSSAAVAA SEQIDICPSS ATDTISGANS 60
61 TPNQAATAPP FQLPIARESS SLFLANTPYL SDFLTMGSSY GGSGGFAKSI TADPSLDYFN 120
121 YKNHSHPDS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.524 | 0.346 | nucleus | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.312 | 0.274 | nucleus | c.15.1 | BRCT domain |
| View | Download | 0.412 | 0.093 | nucleus | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.400 | 0.000 | nucleus | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.360 | 0.000 | nucleus | a.141.1 | Frizzled cystein-rich domain |
| View | Download | 0.259 | N/A | N/A | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.242 | N/A | N/A | a.1.1 | Globin-like |
|
Region A: Residues: [405-468] |
1 11 21 31 41 51
| | | | | |
1 RHNNSSSGIN YSNNKNNNES IEKSQNNSNV INETIDHTDI HAHHADAHDD SFIESEEWLS 60
61 KFIM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.270 | a.144.1 | PABC (PABP) domain |
|
Region A: Residues: [469-1251] |
1 11 21 31 41 51
| | | | | |
1 DSQIDNDLKL NINHFNDIGF NNLHPQNPTT HSEPRNMHNE NRDMHRSASK FQSVSENISP 60
61 REQMSLFKTK QNKAISKFLS DEKIPSTASP SSSASPVQFD KKNVDINEFL LDESVSNLFT 120
121 TRQIDLFKKN VNLYSPLFQN QKDAVSSTSL TPSLTTQTAT TQSGPGWTDS SQKLTFFTEQ 180
181 LRNLIIKENN LKSNLFPTVD ELNHYVDLYQ VEFHKYFPFI HLYSIIPSSE NYPLVISISM 240
241 IGALYGFHST HALLLSKIAR TRVRMFLENT RSNHDKTPIW LMQSLVLLTF TSIFSNDMNA 300
301 FRTVNTQIMI LVQLIKISKL NYPLENFIKP PIESDHVLEY QDNPAVLNQF KAQYNTREQI 360
361 NRNFKYFILA QSRIRICHIV LLISNLFKSL VDFDCCFHSI DLKCGVPCYN EVLFFCENSR 420
421 TWNENLTRFN IVLDSKFSLI EVSNGESNYE KCLMYLSNGN PYLYKNAKIS FKTLLSLLIS 480
481 IHEKINIERD ALKDSYESDF HAKNVQWRMH SRPLVATMLK HWELLYIKNG GILALSDENL 540
541 PIINTNPSFR LIIPLYFFAK LRKCLDIAPT LRCIWNQDWN SMNSSLEKVC YERESLREAT 600
601 EYAVSVITFW IDTVSVMKGK STQTPIFTIT CIFVSILVIA GYMRRLEDFA QNKNSDCMIG 660
661 SLKSTDRILW LKAFKTLKRI ESHLSEREYK LQTFAEFLRV PDNGSLDIES LDSSLIENTL 720
721 NSHDVTNQAL DIITRTRLSS RTLYCGARIL GDTPVWPVSL LFAHALQSRA IYNINHRKSV 780
781 NSV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1007-1123] |
1 11 21 31 41 51
| | | | | |
1 NLPIINTNPS FRLIIPLYFF AKLRKCLDIA PTLRCIWNQD WNSMNSSLEK VCYERESLRE 60
61 ATEYAVSVIT FWIDTVSVMK GKSTQTPIFT ITCIFVSILV IAGYMRRLED FAQNKNS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1124-1251] |
1 11 21 31 41 51
| | | | | |
1 DCMIGSLKST DRILWLKAFK TLKRIESHLS EREYKLQTFA EFLRVPDNGS LDIESLDSSL 60
61 IENTLNSHDV TNQALDIITR TRLSSRTLYC GARILGDTPV WPVSLLFAHA LQSRAIYNIN 120
121 HRKSVNSV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
