| Protein: | ERV41 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 352 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERV41.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..334] | [4..376] |
|
|
0.0 | [1..352] | [1..352] |
|
|
0.0 | [1..334] | [4..376] |
|
|
0.0 | [1..334] | [5..379] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MAGLKTFDAF PKTEEQYKKK STKGGLTSLL TYLFLLFIAW TEFGEYFGGY IDQQYVVDSQ 60
61 VRDTVQINMD IYVNTKCDWL QINVRDQTMD RKLVLEELQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.864 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
|
Region A: Residues: [100-352] |
1 11 21 31 41 51
| | | | | |
1 LEEMPFFIPY DTKVNDINEI ITPELDEILG EAIPAEFREK LDTRSFFDES DPNKAHLPEF 60
61 NGCHVFGSIP VNRVSGELQI TAKSLGYVAS RKAPLEELKF NHVINEFSFG DFYPYIDNPL 120
121 DNTAQFNQDE PLTTYVYYTS VVPTLFKKLG AEVDTNQYSV NDYRYLYKDV AAKGDKMPGI 180
181 FFKYNFEPLS IVVSDVRLSF IQFLVRLVAI CSFLVYCASW IFTLLDMALI TIMGPKWSLR 240
241 YQPDDKTKGI LDR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
