| Protein: | RRN11 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 507 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRN11.
| Description | E-value | Query Range |
Subject Range |
|
|
761.0 | [0..1] | [468..1] |
|
|
757.0 | [0..1] | [468..1] |
|
|
328.0 | [0..1] | [504..1] |
|
|
326.0 | [0..1] | [507..46] |
|
|
127.0 | [0..211] | [438..239] |
|
|
122.0 | [0..185] | [463..153] |
|
|
116.0 | [0..197] | [362..25] |
|
|
56.0 | [0..207] | [266..131] |
|
|
55.0 | [0..188] | [377..111] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MFEVPITLTN RKFAQRRKLK YQYINYISRR FDRISKKSTT TDSLPTPENS AAENNDEEEG 60
61 QNSEAGTYRR SVLQQKKRRR ERHWRSVVGE IYSTTESETD SQEEETEEGG EHDTGIDKED 120
121
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.618 | a.24.18 | Description not found. |
| View | Download | 0.543 | a.74.1 | Cyclin-like |
| View | Download | 0.535 | a.7.8 | GAT domain |
| View | Download | 0.421 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.421 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.388 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.388 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.333 | a.7.8 | GAT domain |
| View | Download | 0.289 | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.277 | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
|
Region A: Residues: [121-292] |
1 11 21 31 41 51
| | | | | |
1 SDEERKFWKK YEKPEKSFEI WRTVSSQNKQ PINKQKMTYH NFKKIEKIPL RKMEIPLLHC 60
61 TKENKLYFQS ISRGLEPLKT STSEVRNYRT RHIVTLTDLL HLNVSRHNWS LAYKIFATLI 120
121 RIPGVQIKSL WGIGVEILDN LSNSSSGLDF LQWMCQIYSS KSRFVQNINY RS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.614 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.598 | N/A | N/A | a.24.24 | Description not found. |
| View | Download | 0.548 | N/A | N/A | b.82.2 | Clavaminate synthase-like |
| View | Download | 0.546 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.545 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.545 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.530 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.530 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.525 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.489 | N/A | N/A | a.118.8 | TPR-like |
|
Region A: Residues: [293-507] |
1 11 21 31 41 51
| | | | | |
1 IVPPFQTGSR THTAKFAITY LWSSLINCQK SMEPSSNIID KPFDTENDLL QELIDKISEW 60
61 VLTPPFMEDA EVWFIYASCH LLKADTLSRQ FVNDNKNNDL IGLDRDIKIN QVIKHIHYVR 120
121 TFLKICLDKG GFAVPSRLIE NQLKSFESRL YGEAQDIQER DVANVYDSID NSSVENSFGD 180
181 VYETNAEFLD TQLMDLSPED NGLDEMHYSD EDSSE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
