| Protein: | CAT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 670 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAT2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [17..666] | [121..771] |
|
|
0.0 | [17..661] | [121..766] |
|
|
0.0 | [17..666] | [121..771] |
|
|
0.0 | [17..661] | [121..766] |
|
|
0.0 | [17..666] | [120..770] |
|
|
0.0 | [17..667] | [119..771] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MRICHSRTLS NLKDLPITSR RAMHSAIVNY STQKAQFPVE TNNGEHYWAE KPNKFYQNKR 60
61 PN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.352 | c.23.1 | CheY-like |
| View | Download | 0.444 | d.58.17 | Metal-binding domain |
| View | Download | 0.385 | d.76.1 | GYF domain |
| View | Download | 0.307 | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.332 | d.58.35 | Pseudouridine synthase |
| View | Download | 0.300 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.281 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.273 | d.37.1 | CBS-domain |
| View | Download | 0.269 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.269 | d.169.1 | C-type lectin-like |
| View | Download | 0.229 | d.95.2 | Homing endonucleases |
| View | Download | 0.219 | d.58.17 | Metal-binding domain |
| View | Download | 0.218 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.216 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.208 | d.93.1 | SH2 domain |
|
Region A: Residues: [63-265] |
1 11 21 31 41 51
| | | | | |
1 FQGITFAKQQ DLPSLPVPEL KSTLDKYLQT IRPFCNDVET FERQQLLCKD FSEHMGPILQ 60
61 DRLKEYANDK RNWMAKFWDE QSYLQYNDPI VPYVSYFYSH MPLPNHLSKI DNDPLIKATA 120
121 IISTVVKFIE AIKDESLPVE IIKGMPFCMN SFSLMFNTSR LPGKPEDNQD TNIFYSVYEN 180
181 NFVTIAYKGK FYKLMTHDGN DKP
|
| Detection Method: | |
| Confidence: | 7.244125 |
| Match: | PF00755 |
| Description: | Choline/Carnitine o-acyltransferase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [266-371] |
1 11 21 31 41 51
| | | | | |
1 LSENEIWRQL YSVVFQGSQS DPKLGGIGSL TSLPRDQWRE VHLELMKDPI SQDSLETIHK 60
61 SSFMLCLDLD QSPVTLEEKS RNCWHGDGIN RFYDKSLQFL VTGNGS
|
|
Region B: Residues: [385-411] |
1 11 21 31 41 51
| | | | | |
1 PTLFLNNYVC QQLNKLDVDD FMRKVIT
|
| Detection Method: | |
| Confidence: | 7.1 |
| Match: | 1cb7B |
| Description: | Glutamate mutase, large subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [372-384] |
1 11 21 31 41 51
| | | | | |
1 SGFLAEHSKM DGT
|
|
Region B: Residues: [412-547] |
1 11 21 31 41 51
| | | | | |
1 PSSTVAMKPM ELPFIITPKI HKAIESAQLQ FKETIGEHDL RVWHYNKYGK TFIKRHGMSP 60
61 DAFIQQVIQL AVFKYLKRQL PTYEAASTRK YFKGRTETGR SVSTASLEFV SKWQNGDVPI 120
121 AEKIQALKHS AKEHST
|
| Detection Method: | |
| Confidence: | 7.1 |
| Match: | 1cb7B |
| Description: | Glutamate mutase, large subunit |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [548-670] |
1 11 21 31 41 51
| | | | | |
1 YLKNAANGNG VDRHFFGLKN MLKSNDDQIP PLFKDPLFNY SSTWLISTSQ LSSEYFDGYG 60
61 WSQVNDNGFG LAYMLNNEWL HINIVNKPAK SGASVNRLHY YLSQAADEIF DALENENKRK 120
121 AKL
|
| Detection Method: | |
| Confidence: | 7.1 |
| Match: | 1cb7B |
| Description: | Glutamate mutase, large subunit |
| Matching Structure (courtesy of the PDB): |
|
