| Protein: | YOX1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 385 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOX1.
| Description | E-value | Query Range |
Subject Range |
|
|
170.0 | [0..11] | [241..220] |
|
|
167.0 | [0..1] | [290..1] |
|
|
166.0 | [0..130] | [361..187] |
|
|
165.0 | [0..130] | [360..196] |
|
|
161.0 | [0..65] | [370..26] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MSQETKMLPS LSSLLSGTEI SSSPVSPSFT NPRTSFHLDD RGTIKLPPLN TSINRPRSVE 60
61 SALRHTVTSL HENSSAYGDD MLKHTQSDSA LSSQLNSSQE TVDESHENLL LTPLNSKKRD 120
121 YSVSSKKNDI LTPL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [135-246] |
1 11 21 31 41 51
| | | | | |
1 SAAKSIIIPS ASKEKRRAFA FITHSQETFP KKEPKIDNAP LARRKRRRTS SQELSILQAE 60
61 FEKCPAPSKE KRIELAESCH MTEKAVQIWF QNKRQAVKRQ RIATSKSTTI IQ
|
| Detection Method: | |
| Confidence: | 74.529817 |
| Match: | 1b8iA |
| Description: | Ultrabithorax (ubx) homeodomain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [247-385] |
1 11 21 31 41 51
| | | | | |
1 TVSPPSPPLD VHATPLASRV KADILRDGSS CSRSSSSSPL ENTPPRPHHS LNRRSSTPSI 60
61 KRSQALTFHL NPQKKTLTPV KTSPNSRVNK LINSIDHSPS KAKRPVSNPS GSPKRKRKFG 120
121 FKIVDQQPLK DLDPNAFRG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
