| Protein: | PSP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 578 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSP2.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-79 | [84..539] | [998..1450] |
|
|
2.0E-53 | [241..578] | [315..720] |
|
|
1.0E-35 | [310..575] | [865..1146] |
|
|
3.0E-34 | [219..485] | [1323..1577] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MSLEEFLGND TLGESVWDEE DINLDAISNT TNIDILKQTK AGEHQRDGHQ QHPHGGHGPM 60
61 NRSRFSNAGP FGGGSMGDFA NHHHPLQHQQ GPPYIVKFSD LPPRFSNFDI EDLFQAKFTK 120
121 FIKFKLFWEI NKNPS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-265] |
1 11 21 31 41 51
| | | | | |
1 ISTLKSGSIF DQNFKRDSKV AFVELYTSRD MDKILNYWTT PLKEIYHITT APAEFEDFKD 60
61 YSTKVKLLTD PKDDAGKPFI TKTQRSKSNP FGSAKPVDTQ SKILDIEEKM ENLHVEDTTT 120
121 LRASLIPSSD
|
| Detection Method: | |
| Confidence: | 9.3 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [266-271] |
1 11 21 31 41 51
| | | | | |
1 SMATTA
|
|
Region B: Residues: [493-578] |
1 11 21 31 41 51
| | | | | |
1 STSNTQQYSI FKPASGFLGQ GNNDSIRNNG RGNYNSSGMN GGSRGRGFGR GRGFGRGAYN 60
61 NRGSRGGRGS SGNYSNYNNR TTDMPL
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [272-344] |
1 11 21 31 41 51
| | | | | |
1 TGSKITILKK QTPTEEESHS ATPTPKPLSY SEVVERSVVN ETSKKGTPLS KLDSPALELQ 60
61 SKPDKSDEFK GGD
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [345-422] |
1 11 21 31 41 51
| | | | | |
1 EQGFEKGGDD KAQLDVSNDK DKGSETDVDK QFTFKNVERE HSMSRTKYNG NHNNNNGNFR 60
61 GSNRYRGGPN GSSYKGGH
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [423-492] |
1 11 21 31 41 51
| | | | | |
1 NNRGNRGGYR GGSSYNNNNN NTNDNNNNNN NSSSNNNNGS RYHDRQNNEE GLTSDSSLDA 60
61 SGNKKNDFTN
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
