| Protein: | TAF11 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 346 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF11.
| Description | E-value | Query Range |
Subject Range |
|
|
319.0 | [0..1] | [346..1] |
|
|
278.0 | [0..1] | [346..1] |
|
|
276.0 | [0..1] | [346..1] |
|
|
176.0 | [0..92] | [194..51] |
|
|
175.0 | [0..92] | [194..119] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MTEPQGPLDT IPKVNYPPIL TIANYFSTKQ MIDQVISEDQ DYVTWKLQNL RTGGTSINNQ 60
61 LNKYPKYKYQ KTRINQQDPD SINKVPENLI FPQDILQQQT QNSNYEDTNT NED
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.302 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.302 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.289 | a.74.1 | Cyclin-like |
| View | Download | 0.289 | a.74.1 | Cyclin-like |
| View | Download | 0.262 | a.4.1 | Homeodomain-like |
| View | Download | 0.255 | d.118.1 | N-acetylmuramoyl-L-alanine amidase-like |
| View | Download | 0.234 | a.4.1 | Homeodomain-like |
| View | Download | 0.234 | a.4.1 | Homeodomain-like |
| View | Download | 0.234 | a.74.1 | Cyclin-like |
| View | Download | 0.233 | a.74.1 | Cyclin-like |
|
Region A: Residues: [114-238] |
1 11 21 31 41 51
| | | | | |
1 ENEKLAQDEQ FKLLVTNLDK DQTNRFEVFH RTSLNKTQVK KLASTVANQT ISENIRVFLQ 60
61 AVGKIYAGEI IELAMIVKNK WLTSQMCIEF DKRTKIGYKL KKYLKKLTFS IIENQQYKQD 120
121 YQSDS
|
| Detection Method: | |
| Confidence: | 100.0 |
| Match: | 1bh8B |
| Description: | TAF(II)28 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [239-346] |
1 11 21 31 41 51
| | | | | |
1 VPEDEPDFYF DDEEVDKRET TLGNSLLQSK SLQQSDHNSQ DLKLQLIEQY NKLVLQFNKL 60
61 DVSIEKYNNS PLLPEHIREA WRLYRLQSDT LPNAYWRTQG EGQGSMFR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.804 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.804 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.723 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.723 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.715 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.712 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.708 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.708 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.674 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.657 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
