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View Structure Prediction Details

Protein: YML009C-A
Organism: Saccharomyces cerevisiae
Length: 108 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YML009C-A.

Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKDRDSVF HRNIEIFITI LINVVILKSF LLISSWVILV LLLVINDLPM YCYHHSLTYF  60
   61 LGCSKQTYFH RLGYPMQKLR HLLYFYYCYF LPRWKPRRRL TYHRYHPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.820 a.74.1 Cyclin-like
View Download 0.820 a.74.1 Cyclin-like
View Download 0.785 a.277.1 Description not found.
View Download 0.760 a.150.1 Anti-sigma factor AsiA
View Download 0.724 a.7.6 Ribosomal protein S20
View Download 0.718 a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.718 a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.655 a.7.6 Ribosomal protein S20
View Download 0.585 a.4.5 "Winged helix" DNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle