| Protein: | SEC39 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 709 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC39.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..709] | [1..709] |
|
Region A: Residues: [1-285] |
1 11 21 31 41 51
| | | | | |
1 MLEEQLYLLA CIFASRADTR NIKKLSTRLG SQSKYLEILC VLWPELDDPK NLLFLRELEE 60
61 EVQSPEGEET TDEDVIVELL ESDSSLIPLI ESDTTTRSNR YHELQEFISK KLNNKTLENF 120
121 EEWLRERILI CNEMIPETPL LYSVLWETAK SKVLSTKFIG WVEGVLKPLD HLNKRLHLIF 180
181 KINEWEKMPD SELFKIIFDG VEDMQGYIGI ADVIEDELAP TLSYGKKWET FITEFFNKQQ 240
241 FSLKSDTNYQ LFIKLYYSLE KGVKDNSEAS RKLQSNVVDI LFHNS
|
| Detection Method: |  |
| Confidence: | 1.67 |
| Match: | 1qgkA |
| Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [286-389] |
1 11 21 31 41 51
| | | | | |
1 ENLFNLSSLT HKLDELWSIL SGFPDEITIE EQKTITALEM KQFMEFFIKC STKFSFKEIF 60
61 AITQEEESAQ LAHFSSLCHE EFNKANEISS FLQAMYETVL DISK
|
| Detection Method: | |
| Confidence: | 1.67 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [390-498] |
1 11 21 31 41 51
| | | | | |
1 DDKIFTRISM DEKLYSILEI LLQMNEFAYI EAIIERFDYS NNTQIYELLV KFFWHFFNNA 60
61 SNGLRKEPEM KKASQTLQII QKHMSQRAGT NLTKLEVLLE ISDKLSHYS
|
| Detection Method: | |
| Confidence: | 1.67 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [499-709] |
1 11 21 31 41 51
| | | | | |
1 INLNKSHNGA RDTAFKPSNI LEYRDCPLDI ISNLLELNPR LYKDLPTTKS LLFGIYDSLS 60
61 INREGQTGKV EVDLMVLHID YALVNLDFGT AYELGKQVFE ICQEAGQHMM KALGDEHWLT 120
121 FYQMGKFVDP NWVDNEIPTE IIVLQMSILG RLLEVCPLEE VEIVTSQWST LELELSARDL 180
181 VKDKYALDGQ NDNKSKVGGI AREIFHNVTN F
|
| Detection Method: | |
| Confidence: | 1.67 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
