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View Structure Prediction Details

Protein: DIF1
Organism: Saccharomyces cerevisiae
Length: 133 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIF1.

Description E-value Query
Range
Subject
Range
DIF1_ASHGO - Damage-regulated import facilitator 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923...
gi|45190727, gi|... - gi|45190727|ref|NP_984981.1| AER122Cp [Ashbya gossypii ATCC 10895], gi|44983706|gb|AAS52805.1| AER12...
61.0 [0..14] [114..56]
DIF1_CANGA - Damage-regulated import facilitator 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / N...
gi|49528699 - gi|49528699|emb|CAG62361.1| unnamed protein product [Candida glabrata]
58.0 [0..36] [133..18]
DIF1_KLULA - Damage-regulated import facilitator 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 707...
gi|49640909 - gi|49640909|emb|CAH02170.1| KLLA0B05423p [Kluyveromyces lactis]
52.0 [0..17] [114..9]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAQLEWASS LVPKRQLQQQ QQQQEQQQQQ QQDFHKDQLM TVGMRIRQRV DQGYASRTPS  60
   61 TSDASLQPGV IRDYSSVIVP QFTRSPLPTA NSLPPMLINQ RTMSTEASSL EKWDVAEPAA 120
  121 EHETMVNGSK RRL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 48.187087
Match: PF08591.1
Description: No description for PF08591.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle