| Protein: | ATG23 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 453 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG23.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-94 | [55..438] | [144..508] |
|
|
3.0E-90 | [55..450] | [152..527] |
|
|
8.0E-82 | [55..435] | [88..454] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MELNQVLEKK EQILQYLGTL VGLHEKALSD VNSASQVTSI RKDITICLND LCRINDLLVS 60
61 HDGLLKREIG SLLRDKQELL ELNEREQLLW KERKSWHIKQ ETDAAPADYV IDKDAIITIS 120
121 SH
|
| Detection Method: |  |
| Confidence: | 22.09691 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [123-261] |
1 11 21 31 41 51
| | | | | |
1 HRTSLNKYIE SVGAENTILS NTDDSDAMIE EVQNAESSAD QMIRNYKLLQ LSHKQAKSEI 60
61 IRLETLLRDF KKDNKFIEEE LKRQSGRIRS EMGNIDFHLS KIEESKHQLM KRIGFESPLT 120
121 QEKSLSEKIF NLRLSSADE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.939 | 0.760 | autophagy | a.47.2 | t-snare proteins |
|
Region A: Residues: [262-453] |
1 11 21 31 41 51
| | | | | |
1 DYNERQTINM KNFVHMKDLI ELKIEDLQEQ LMRNKNESST VLTQRELWLD CQKKVGDLES 60
61 KLITKLRSSS NSKIPPNEMS EMINSTIQYL NNLLDSSDEK LTTTLISNER DVLSKACEEL 120
121 HSESTTAQDG SSALPSKPID IHKSHKGSNA SSNLKQPSTP SFLVASKSPP KIGISESVVN 180
181 ANKNDAISKK VE
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 1gk4A_ |
| Description: | Vimentin coil |
Matching Structure (courtesy of the PDB): |
|
