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View Structure Prediction Details

Protein: RPS29A
Organism: Saccharomyces cerevisiae
Length: 56 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS29A.

Description E-value Query
Range
Subject
Range
gi|222625880, gi... - gi|222625880|gb|EEE60012.1| hypothetical protein OsJ_12757 [Oryza sativa Japonica Group], gi|1087113...
111.0 [0..1] [54..1]
gi|50749078 - gi|50749078|ref|XP_426478.1| PREDICTED: similar to ribosomal protein S29 [Gallus gallus]
105.0 [0..1] [54..1]
gi|76671099 - gi|76671099|ref|XP_871692.1| PREDICTED: similar to 40S ribosomal protein S29 [Bos taurus]
102.0 [0..1] [54..156]
gi|28316886 - gi|28316886|gb|AAL68340.2| RH06643p [Drosophila melanogaster]
96.0 [0..1] [54..13]
gi|55233760, gi|... - gi|58395808|ref|XP_321509.2| ENSANGP00000018161 [Anopheles gambiae str. PEST], gi|55233760|gb|EAA013...
94.0 [0..1] [54..26]
gi|109083504 - gi|109083504|ref|XP_001098037.1| PREDICTED: similar to ribosomal protein S29 isoform 2 [Macaca mulat...
92.0 [0..1] [54..1]
RS29_PLUXY - 40S ribosomal protein S29 OS=Plutella xylostella GN=RpS29 PE=3 SV=1
92.0 [0..1] [54..1]
gi|60811362 - gi|60811362|gb|AAX36170.1| ribosomal protein S29 [synthetic construct]
91.0 [0..1] [54..1]
RS29_SCALT - 40S ribosomal protein S29 OS=Scarabaeus laticollis GN=RpS29 PE=3 SV=1
91.0 [0..1] [54..1]

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Predicted Domain #1
Region A:
Residues: [1-56]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHENVWFSH PRRYGKGSRQ CRVCSSHTGL IRKYGLNICR QCFREKANDI GFNKFR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.823909
Match: PF00253.12
Description: No description for PF00253.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle