| Protein: | ATG33 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 197 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG33.
| Description | E-value | Query Range |
Subject Range |
|
|
211.0 | [0..1] | [113..1] |
|
|
109.0 | [0..8] | [117..10] |
|
|
66.0 | [0..1] | [143..1] |
|
|
59.0 | [0..1] | [171..1] |
|
|
59.0 | [0..4] | [194..7] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MSVCLAITKG IAVSSIGLYS GLLASASLIT STTPLEVLTG SLTPTLTTLK NAATALGAFA 60
61 STFFCVSFFG APPSLRHPYL LYGMLVAPLS SFVLGCASNY QSRKYSKVSK ESSLFPEDSK 120
121 LAASELSDSI IDLGEDNHAS ENTPRDGKPA ATTVSKPAEA LHTGPPIHTK NLIAATAIAI 180
181 VGFVQAVIGV YGEGQFI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.354 | a.172.1 | Helical scaffold and wing domains of SecA |
| View | Download | 0.307 | a.24.3 | Cytochromes |
| View | Download | 0.297 | d.173.1 | Methionine synthase activation domain-like |
| View | Download | 0.242 | a.129.1 | GroEL equatorial domain-like |
| View | Download | 0.240 | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
| View | Download | 0.229 | b.91.1 | E2 regulatory, transactivation domain |
| View | Download | 0.225 | a.118.8 | TPR-like |
| View | Download | 0.225 | a.118.8 | TPR-like |
| View | Download | 0.220 | a.24.23 | Description not found. |
| View | Download | 0.202 | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
