| Protein: | BUD8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 603 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MIQSDEDNLD SSETTASTSY SGTSSVSSRL QLRTSLFFEN LNGAHGNPDA ETEMATVAYE 60
61 TTSR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [65-418] |
1 11 21 31 41 51
| | | | | |
1 GQGFAVYINN ERFSQIMGAS TSSSSSSNSS SITQFHDTQD NNIPSNTTVR PTSLRRDNED 60
61 TVPLRNVTPS QNAAVRPERA VNSPSSQRLS CALTISTSVL MGEDVEGSPI EQEHSRVVSS 120
121 LYSSLANRGN DESKNGTPPR PTSIEPNETT EHSFFSYHYD DTLEPDVEEA VRLTKNKTSN 180
181 VNFISSTGSK GEGETEDEVI DQYEPVNESK FIPHKLKIPE KAGSIKSSTS DDSHSPGAPG 240
241 TSARKIKIPQ SPSLIGNILI PSHNSDSSNE SSPKDHIGHN NEEKFSSKST RKPSTSLEEE 300
301 GPPIGLPSIP VLRSVSGPSK WTKTPLRLES GNSTKSDPFS RYEGHKTPSP LTKM
|
| Detection Method: | |
| Confidence: | 12.48 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [419-540] |
1 11 21 31 41 51
| | | | | |
1 NKKKNKTLPE HGQPLVLAPI KSQSSESDTG QNSIIEKPAR SIRRKQQEKT DNRKEDRHDA 60
61 ENIDLEARMP IQHIDTASIH SFDSGQNGFR DVYSIENIIV ILLCCSIVPP LFFIIGCSSR 120
121 RK
|
| Detection Method: | |
| Confidence: | 12.48 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [541-603] |
1 11 21 31 41 51
| | | | | |
1 LVSDYRLMRL LMNKEHRAAL LQGFIWDVDL RWFRMFCLIL GAAETVIVMA GIAIGFGVGI 60
61 TRE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
