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View Structure Prediction Details

Protein: FKS1
Organism: Saccharomyces cerevisiae
Length: 1876 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FKS1.

Description E-value Query
Range
Subject
Range
gi|6166503 - gi|6166503|gb|AAF04861.1|AF198090_1 Fks1p [Yarrowia lipolytica]
0.0 [2..1874] [48..1943]
gi|577655 - gi|577655|dbj|BAA07707.1| Gsc2p [Saccharomyces cerevisiae]
0.0 [1..1876] [8..1895]
BGS4_SCHPO - 1,3-beta-glucan synthase component bgs4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bg...
bgs4 - 1,3-beta-glucan synthase subunit Bgs4
0.0 [4..1864] [25..1937]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [3..1857] [22..1864]
gi|5007025 - gi|5007025|gb|AAD37783.1|AF148715_1 glucan synthase [Paracoccidioides brasiliensis]
0.0 [6..1856] [4..1879]
gi|2274847 - gi|2274847|dbj|BAA21535.1| beta-1,3-glucan synthase catalytic subunit 1 [Candida albicans]
0.0 [2..1873] [4..1877]
gi|1491929 - gi|1491929|gb|AAC49993.1| 1,3-beta-D-glucan synthase catalytic subunit
gi|49092810, gi|... - gi|67526543|ref|XP_661333.1| hypothetical protein AN3729.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
0.0 [2..1861] [12..1884]
gi|2149093 - gi|2149093|gb|AAB58492.1| fksp [Aspergillus fumigatus]
0.0 [8..1862] [5..1884]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTDQQPYQG QTDYTQGPGN GQSQEQDYDQ YGQPLYPSQA DGYYDPNVAA GTEADMYGQQ  60
   61 PPNESYDQDY TNGEYYGQPP NMAAQDGENF SDFSSYGPPG TPGYDSYGGQ YTASQMSYGE 120
  121 PNSSGTSTPI YGNYDPNAIA MALPNEPYPA WTA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [154-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSQSPVSIEQ IEDIFIDLTN RLGFQRDSMR NMFDHFMVLL DSRSSRMSPD QALLSLHADY  60
   61 IGGDTANYKK WYFAAQLDMD DEIGFRNMSL GKLSRKARKA KKKNKKAMEE ANPEDTEETL 120
  121 NKIEGDNSLE AADFRWKAKM NQLSPLERVR HIALYLLCWG EANQVRFTAE CLCFIYKCAL 180
  181 DYLDSPLCQQ RQEPMPEGDF LNRVITPIYH FIRNQVYEIV DGRFVKRERD HNKIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.831 N/A N/A a.74.1 Cyclin-like
View Download 0.787 N/A N/A a.74.1 Cyclin-like
View Download 0.709 N/A N/A a.74.1 Cyclin-like
View Download 0.580 N/A N/A a.74.1 Cyclin-like
View Download 0.568 N/A N/A a.74.1 Cyclin-like

Predicted Domain #3
Region A:
Residues: [389-802]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYDDLNQLFW YPEGIAKIVL EDGTKLIELP LEERYLRLGD VVWDDVFFKT YKETRTWLHL  60
   61 VTNFNRIWVM HISIFWMYFA YNSPTFYTHN YQQLVDNQPL AAYKWASCAL GGTVASLIQI 120
  121 VATLCEWSFV PRKWAGAQHL SRRFWFLCII FGINLGPIIF VFAYDKDTVY STAAHVVAAV 180
  181 MFFVAVATII FFSIMPLGGL FTSYMKKSTR RYVASQTFTA AFAPLHGLDR WMSYLVWVTV 240
  241 FAAKYSESYY FLVLSLRDPI RILSTTAMRC TGEYWWGAVL CKVQPKIVLG LVIATDFILF 300
  301 FLDTYLWYII VNTIFSVGKS FYLGISILTP WRNIFTRLPK RIYSKILATT DMEIKYKPKV 360
  361 LISQVWNAII ISMYREHLLA IDHVQKLLYH QVPSEIEGKR TLRAPTFFVS QDDN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [803-1666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFETEFFPRD SEAERRISFF AQSLSTPIPE PLPVDNMPTF TVLTPHYAER ILLSLREIIR  60
   61 EDDQFSRVTL LEYLKQLHPV EWECFVKDTK ILAEETAAYE GNENEAEKED ALKSQIDDLP 120
  121 FYCIGFKSAA PEYTLRTRIW ASLRSQTLYR TISGFMNYSR AIKLLYRVEN PEIVQMFGGN 180
  181 AEGLERELEK MARRKFKFLV SMQRLAKFKP HELENAEFLL RAYPDLQIAY LDEEPPLTEG 240
  241 EEPRIYSALI DGHCEILDNG RRRPKFRVQL SGNPILGDGK SDNQNHALIF YRGEYIQLID 300
  301 ANQDNYLEEC LKIRSVLAEF EELNVEQVNP YAPGLRYEEQ TTNHPVAIVG AREYIFSENS 360
  361 GVLGDVAAGK EQTFGTLFAR TLSQIGGKLH YGHPDFINAT FMTTRGGVSK AQKGLHLNED 420
  421 IYAGMNAMLR GGRIKHCEYY QCGKGRDLGF GTILNFTTKI GAGMGEQMLS REYYYLGTQL 480
  481 PVDRFLTFYY AHPGFHLNNL FIQLSLQMFM LTLVNLSSLA HESIMCIYDR NKPKTDVLVP 540
  541 IGCYNFQPAV DWVRRYTLSI FIVFWIAFVP IVVQELIERG LWKATQRFFC HLLSLSPMFE 600
  601 VFAGQIYSSA LLSDLAIGGA RYISTGRGFA TSRIPFSILY SRFAGSAIYM GARSMLMLLF 660
  661 GTVAHWQAPL LWFWASLSSL IFAPFVFNPH QFAWEDFFLD YRDYIRWLSR GNNQYHRNSW 720
  721 IGYVRMSRAR ITGFKRKLVG DESEKAAGDA SRAHRTNLIM AEIIPCAIYA AGCFIAFTFI 780
  781 NAQTGVKTTD DDRVNSVLRI IICTLAPIAV NLGVLFFCMG MSCCSGPLFG MCCKKTGSVM 840
  841 AGIAHGVAVI VHIAFFIVMW VLES

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 1000.0
Match: PF02364
Description: 1,3-beta-glucan synthase component

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [1667-1876]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNFVRMLIGV VTCIQCQRLI FHCMTALMLT REFKNDHANT AFWTGKWYGK GMGYMAWTQP  60
   61 SRELTAKVIE LSEFAADFVL GHVILICQLP LIIIPKIDKF HSIMLFWLKP SRQIRPPIYS 120
  121 LKQTRLRKRM VKKYCSLYFL VLAIFAGCII GPAVASAKIH KHIGDSLDGV VHNLFQPINT 180
  181 TNNDTGSQMS TYQSHYYTHT PSLKTWSTIK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [620-784]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYLVWVTVF AAKYSESYYF LVLSLRDPIR ILSTTAMRCT GEYWWGAVLC KVQPKIVLGL  60
   61 VIATDFILFF LDTYLWYIIV NTIFSVGKSF YLGISILTPW RNIFTRLPKR IYSKILATTD 120
  121 MEIKYKPKVL ISQVWNAIII SMYREHLLAI DHVQKLLYHQ VPSEI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [785-850]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGKRTLRAPT FFVSQDDNNF ETEFFPRDSE AERRISFFAQ SLSTPIPEPL PVDNMPTFTV  60
   61 LTPHYA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [851-941]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERILLSLREI IREDDQFSRV TLLEYLKQLH PVEWECFVKD TKILAEETAA YEGNENEAEK  60
   61 EDALKSQIDD LPFYCIGFKS AAPEYTLRTR I

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [942-1106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WASLRSQTLY RTISGFMNYS RAIKLLYRVE NPEIVQMFGG NAEGLERELE KMARRKFKFL  60
   61 VSMQRLAKFK PHELENAEFL LRAYPDLQIA YLDEEPPLTE GEEPRIYSAL IDGHCEILDN 120
  121 GRRRPKFRVQ LSGNPILGDG KSDNQNHALI FYRGEYIQLI DANQD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1107-1237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYLEECLKIR SVLAEFEELN VEQVNPYAPG LRYEEQTTNH PVAIVGAREY IFSENSGVLG  60
   61 DVAAGKEQTF GTLFARTLSQ IGGKLHYGHP DFINATFMTT RGGVSKAQKG LHLNEDIYAG 120
  121 MNAMLRGGRI K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1238-1440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HCEYYQCGKG RDLGFGTILN FTTKIGAGMG EQMLSREYYY LGTQLPVDRF LTFYYAHPGF  60
   61 HLNNLFIQLS LQMFMLTLVN LSSLAHESIM CIYDRNKPKT DVLVPIGCYN FQPAVDWVRR 120
  121 YTLSIFIVFW IAFVPIVVQE LIERGLWKAT QRFFCHLLSL SPMFEVFAGQ IYSSALLSDL 180
  181 AIGGARYIST GRGFATSRIP FSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #12
Region A:
Residues: [1441-1542]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYSRFAGSAI YMGARSMLML LFGTVAHWQA PLLWFWASLS SLIFAPFVFN PHQFAWEDFF  60
   61 LDYRDYIRWL SRGNNQYHRN SWIGYVRMSR ARITGFKRKL VG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #13
Region A:
Residues: [1543-1666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DESEKAAGDA SRAHRTNLIM AEIIPCAIYA AGCFIAFTFI NAQTGVKTTD DDRVNSVLRI  60
   61 IICTLAPIAV NLGVLFFCMG MSCCSGPLFG MCCKKTGSVM AGIAHGVAVI VHIAFFIVMW 120
  121 VLES

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #14
Region A:
Residues: [1667-1876]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNFVRMLIGV VTCIQCQRLI FHCMTALMLT REFKNDHANT AFWTGKWYGK GMGYMAWTQP  60
   61 SRELTAKVIE LSEFAADFVL GHVILICQLP LIIIPKIDKF HSIMLFWLKP SRQIRPPIYS 120
  121 LKQTRLRKRM VKKYCSLYFL VLAIFAGCII GPAVASAKIH KHIGDSLDGV VHNLFQPINT 180
  181 TNNDTGSQMS TYQSHYYTHT PSLKTWSTIK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle