| Protein: | IMH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 911 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IMH1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [5..911] | [854..1749] |
|
|
0.0 | [5..911] | [857..1752] |
|
|
0.0 | [5..911] | [853..1748] |
|
|
0.0 | [5..911] | [857..1752] |
|
|
0.0 | [3..911] | [847..1747] |
|
|
0.0 | [5..911] | [854..1749] |
|
Region A: Residues: [1-336] |
1 11 21 31 41 51
| | | | | |
1 MFKQLSQIGK NLTDELAKGL ADDMSPTPSE QQIEDDKSGL PKEIQAKLRK FEKYEQKYPL 60
61 LLSAYKNEKL KSEKLEAVEK ILAENTPISN IDDAVDTLPA FFQDLNNKNN LLNDEIKRLT 120
121 KQNSEIPESA SSETLKDKEE EFLKKEQNYK NDIDDLKKKM EALNIELDTV QKEKNDTVSG 180
181 LREKIVALEN ILKEEREAKK QKEEVSISEL KEELAIKNHS LEDSRMKITE LEQNLSSKST 240
241 IMEEKSSELA ELNITLKEKE RKLSELEKKM KELPKAISHQ NVGNNNRRKK NRNKGKKNKG 300
301 GITTGDISEE ETVDNSINTE EYDKLKENLQ ELQEKY
|
| Detection Method: |  |
| Confidence: | 53.9897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [337-552] |
1 11 21 31 41 51
| | | | | |
1 KDCEDWKQKY EDIEAELKDA KELENSQLEK SAKELETLNT ELIDTKKSLK EKNSELEEVR 60
61 DMLRTVGNEL VDAKDEIKES SSKQNEEVKT VKLELDDLRH KNATMIEAYE AKNTELRSKI 120
121 ELLSKKVEHL KNLCTEKEKE QTTSQNKVAK LNEEISQLTY EKSNITKELT SLRTSYKQKE 180
181 KTVSYLEEQV KQFSEQKDVA EKSTEQLRKD HAKISN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [553-636] |
1 11 21 31 41 51
| | | | | |
1 RLDLLKKENE TLHNDIAKNS NSYEEYLKEN GKLSERLNIL QEKYNTLQNV KSNSNEHIDS 60
61 IKRQCEELNV KLKESTKKIL SLED
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [637-719] |
1 11 21 31 41 51
| | | | | |
1 ELNEYANIVQ DKTREANTLR RLVSDSQTDD SSKQKELENK LAYLTDEKNK LEAELDLQTS 60
61 RKATELQEWK HTVTELKSEI HAL
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [720-781] |
1 11 21 31 41 51
| | | | | |
1 KLREEGLKSE VDALKHVNND IKRKTQATSD DSDQLEQITS NLKLSLSKAD EKNFELQSAN 60
61 EK
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [782-911] |
1 11 21 31 41 51
| | | | | |
1 LLNLNNELNK KFDRLLKNYR SLSSQLNALK ERQYSDKSGR VSRSGSIGTL ANANIDSSPA 60
61 NNSNPTKLEK IRSSSSLELD SEKNEKIAYI KNVLLGFLEH KEQRNQLLPV ISMLLQLDST 120
121 DEKRLVMSLK
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
